Genome: Xylanimonas cellulosilytica DSM 15894 (NC_013530.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 47290-47392 (+)glycine47552-50684 (+)Xcel_0044

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))
Xcel_0044Operon

DOOR ID: 641278
Xcel_0044,
Xcel_0045,
Xcel_0046
View Structure
2 212723-212827 (+)TPP212896-214057 (+)Xcel_0178

ABC transporter; periplasmic binding protein; thiB subfamily
Xcel_0178Operon

DOOR ID: 641309
Xcel_0178,
Xcel_0179,
Xcel_0180
View Structure
3 283060-283175 (+)SAM-IV283209-283665 (+)Xcel_0238

Xcel_0238Single gene

DOOR ID: 2735902
Xcel_0238 View Structure
4 288727-288843 (-)SAM-IV287857-288691 (-)Xcel_0243

Xcel_0243Operon

DOOR ID: 641325
Xcel_0243,
Xcel_0244,
Xcel_0245
View Structure
5 795532-795633 (+)ZMP-ZTP795677-797318 (+)Xcel_0738

Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (0) (ATIC) (IMP synthase) (Inosinicase)]
Xcel_0738Single gene

DOOR ID: 2736021
Xcel_0738 View Structure
6 818668-818778 (+)ZMP-ZTP818853-820140 (+)Xcel_0754

Serine hydroxymethyltransferase (SHMT) (Serine methylase)
Xcel_0754Operon

DOOR ID: 641424
Xcel_0754,
Xcel_0755
View Structure
7 1578226-1578335 (+)TPP1580079-1580748 (+)Xcel_1455

Thiamine-phosphate synthase (TP synthase) (TPS) (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase) (TMP-PPase)
Xcel_1455Operon

DOOR ID: 641601
Xcel_1452,
Xcel_1453,
Xcel_1454,
Xcel_1455,
Xcel_1456,
Xcel_1457,
Xcel_1458
View Structure
8 1746573-1746690 (+)SAM-IV1746699-1747008 (+)Xcel_1610

Xcel_1610Operon

DOOR ID: 641635
Xcel_1610,
Xcel_1611
View Structure
9 1869901-1870036 (+)FMN1870132-1871185 (+)Xcel_1726

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
Xcel_1726Operon

DOOR ID: 641661
Xcel_1726,
Xcel_1727,
Xcel_1728,
Xcel_1729
View Structure
10 3159638-3159790 (-)ydaO-yuaA3158879-3159635 (-)Xcel_2843

NLP/P60 protein
Xcel_2843Single gene

DOOR ID: 2736590
Xcel_2843 View Structure
11 3160801-3160948 (-)ydaO-yuaA3160017-3160797 (-)Xcel_2844

NLP/P60 protein
Xcel_2844Single gene

DOOR ID: 2736591
Xcel_2844 View Structure
12 3431756-3431867 (-)SAM-IV3430464-3431724 (-)Xcel_3097

Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein
Xcel_3097Operon

DOOR ID: 641965
Xcel_3096,
Xcel_3097
View Structure
13 3458085-3458200 (-)SAM-IV3456643-3458074 (-)Xcel_3118

Cysteine desulfurase
Xcel_3118Single gene

DOOR ID: 2736682
Xcel_3118 View Structure
14 3458323-3458409 (+)SAM3458414-3458897 (+)Xcel_3119

Rhodanese domain protein
Xcel_3119Operon

DOOR ID: 641971
Xcel_3119,
Xcel_3120
View Structure
15 3512257-3512369 (-)SAM-IV3510610-3512200 (-)Xcel_3169

Extracellular solute-binding protein family 5
Xcel_3169Operon

DOOR ID: 641982
Xcel_3165,
Xcel_3166,
Xcel_3167,
Xcel_3168,
Xcel_3169
View Structure