Genome: Veillonella parvula DSM 2008 (NC_013520.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 264925-265114 (+)cobalamin265315-266488 (+)Vpar_0195

Periplasmic binding protein
Vpar_0195Single gene

DOOR ID: 2731404
Vpar_0195 View Structure
2 382266-382427 (+)glmS382550-384383 (+)Vpar_0299

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
Vpar_0299Operon

DOOR ID: 638521
Vpar_0299,
Vpar_0300,
Vpar_0301
View Structure
3 396335-396440 (-)TPP395085-396282 (-)Vpar_0312

Hydroxymethylpyrimidine transporter CytX
Vpar_0312Single gene

DOOR ID: 2731460
Vpar_0312 View Structure
4 396522-396616 (+)TPP396679-397159 (+)Vpar_0313

ThiW protein
Vpar_0313Operon

DOOR ID: 638525
Vpar_0313,
Vpar_0314,
Vpar_0315
View Structure
5 551931-552038 (+)TPP552116-553421 (+)Vpar_0454

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Vpar_0454Operon

DOOR ID: 638556
Vpar_0454,
Vpar_0455,
Vpar_0456,
Vpar_0457,
Vpar_0458,
Vpar_0459
View Structure
6 986751-986851 (+)SAM986900-988091 (+)Vpar_0845

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)
Vpar_0845Operon

DOOR ID: 638626
Vpar_0845,
Vpar_0846,
Vpar_0847,
Vpar_0848,
Vpar_0849,
Vpar_0850,
Vpar_0851,
Vpar_0852,
Vpar_0853,
Vpar_0854,
Vpar_0855
View Structure
7 1069288-1069460 (+)lysine1069536-1070334 (+)Vpar_0928

4-hydroxy-tetrahydrodipicolinate reductase (HTPA reductase)
Vpar_0928Operon

DOOR ID: 638638
Vpar_0928,
Vpar_0929,
Vpar_0930
View Structure
8 1095566-1095681 (-)FMN1094283-1095498 (-)Vpar_0954

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
Vpar_0954Operon

DOOR ID: 638643
Vpar_0951,
Vpar_0952,
Vpar_0953,
Vpar_0954
View Structure
9 1779192-1779379 (-)cobalamin1778108-1779047 (-)Vpar_1564

Binding-protein-dependent transport systems inner membrane component
Vpar_1564Operon

DOOR ID: 638767
Vpar_1563,
Vpar_1564
View Structure
10 2019003-2019179 (-)cobalamin2016550-2018713 (-)Vpar_1763

Methylmalonyl-CoA mutase
Vpar_1763Operon

DOOR ID: 638806
Vpar_1761,
Vpar_1762,
Vpar_1763
View Structure