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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
139739-139922
(+)
FMN
140014-140659 (+)
ribB
3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
D11S_0155
Single gene
DOOR ID:
2710922
D11S_0155
(ribB)
View Structure
2
728763-728806
(+)
PreQ1
728809-729514 (+)
D11S_0805
7-cyano-7-deazaguanine synthase (0) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)
D11S_0805
Operon
DOOR ID:
628127
D11S_0804,
D11S_0805
View Structure
3
995015-995059
(-)
PreQ1
994483-994909 (-)
D11S_1079
6-carboxy-5;6;7;8-tetrahydropterin synthase
D11S_1079
Operon
DOOR ID:
628185
D11S_1078,
D11S_1079
View Structure
4
1071590-1071677
(+)
TPP
1071793-1072174 (+)
D11S_1152
Phosphomethylpyrimidine kinase
D11S_1152
Operon
DOOR ID:
628201
D11S_1152,
D11S_1153,
D11S_1154
(thiP)
,
D11S_1155,
D11S_1156
View Structure
5
1333884-1334032
(-)
MOCO
1332347-1332869 (-)
D11S_1406
Cyclic pyranopterin monophosphate synthase (7) (Molybdenum cofactor biosynthesis protein C)
D11S_1406
Operon
DOOR ID:
628251
D11S_1404,
D11S_1405,
D11S_1406,
D11S_1407
(moaA)
View Structure
6
1374755-1374929
(+)
lysine
1375022-1376555 (+)
D11S_1448
D11S_1448
Single gene
DOOR ID:
2711318
D11S_1448
View Structure
7
1995217-1995365
(+)
glycine
1995471-1996845 (+)
D11S_2077
Sodium:alanine symporter
D11S_2077
Single gene
DOOR ID:
2711501
D11S_2077
View Structure
Genome:
Aggregatibacter actinomycetemcomitans D11S-1
(
NC_013416.1
);
Phylum:
Gammaproteobacteria
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