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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
230766-230930
(+)
glmS
231009-232830 (+)
Adeg_0231
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
Adeg_0231
Single gene
DOOR ID:
2704402
Adeg_0231
View Structure
2
272020-272193
(+)
cobalamin
272280-273396 (+)
Adeg_0277
Periplasmic binding protein
Adeg_0277
Operon
DOOR ID:
1311050
Adeg_0277,
Adeg_0278
View Structure
3
658532-658656
(+)
MOCO
658714-659722 (+)
Adeg_0640
Extracellular solute-binding protein family 1
Adeg_0640
Operon
DOOR ID:
1311122
Adeg_0640,
Adeg_0641,
Adeg_0642
View Structure
4
672658-672805
(-)
ydaO-yuaA
671094-672549 (-)
Adeg_0651
Alpha;alpha-trehalose-phosphate synthase (UDP-forming) (5)
Adeg_0651
Operon
DOOR ID:
1311124
Adeg_0650,
Adeg_0651
View Structure
5
946463-946655
(+)
cobalamin
946772-947525 (+)
Adeg_0927
Cobalt transport protein CbiM (Energy-coupling factor transporter probable substrate-capture protein CbiM) (ECF transporter S component CbiM)
Adeg_0927
Operon
DOOR ID:
1311185
Adeg_0927,
Adeg_0928,
Adeg_0929
View Structure
6
1412893-1413032
(-)
ydaO-yuaA
1411513-1412797 (-)
Adeg_1408
Lysine 2;3-aminomutase YodO family protein
Adeg_1408
Operon
DOOR ID:
1311281
Adeg_1407,
Adeg_1408
View Structure
7
1437072-1437202
(-)
SAM
1435775-1436996 (-)
Adeg_1432
Adeg_1432
Operon
DOOR ID:
1311287
Adeg_1430,
Adeg_1431,
Adeg_1432
View Structure
8
1464504-1464567
(+)
fluoride
1464636-1465797 (+)
Adeg_1458
Sodium/hydrogen exchanger
Adeg_1458
Operon
DOOR ID:
1311290
Adeg_1458,
Adeg_1459,
Adeg_1460,
Adeg_1461,
Adeg_1462
View Structure
9
1614333-1614497
(-)
ydaO-yuaA
1613564-1614326 (-)
Adeg_1626
Cell wall hydrolase SleB
Adeg_1626
Single gene
DOOR ID:
2704725
Adeg_1626
View Structure
Genome:
Ammonifex degensii KC4
(
NC_013385.1
);
Phylum:
Firmicutes
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