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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
77282-77381
(-)
TPP
76267-77251 (-)
tbpA
ECO26_0070
Operon
DOOR ID:
623986
ECO26_0068
(thiQ)
,
ECO26_0069
(thiP)
,
ECO26_0070
(tbpA)
View Structure
2
952318-952462
(+)
MOCO
953460-953973 (+)
moaB
ECO26_0908
Operon
DOOR ID:
624153
ECO26_0907
(moaA)
,
ECO26_0908
(moaB)
,
ECO26_0909
(moaC)
,
ECO26_0910
(moaD)
,
ECO26_0911
(moaE)
View Structure
3
2515128-2515229
(+)
yybP-ykoY
2515359-2515926 (+)
yebN
ECO26_2591
Single gene
DOOR ID:
2701421
ECO26_2591
(yebN)
View Structure
4
2937430-2937526
(-)
TPP
2936606-2937395 (-)
thiM
ECO26_3013
Operon
DOOR ID:
624536
ECO26_3010
(yegW)
,
ECO26_3011
(yegX)
,
ECO26_3012
(thiD)
,
ECO26_3013
(thiM)
View Structure
5
4107719-4107867
(-)
FMN
4106961-4107615 (-)
ribB
ECO26_4143
Single gene
DOOR ID:
2701861
ECO26_4143
(ribB)
View Structure
6
5128982-5129172
(+)
cobalamin
5129236-5131081 (+)
btuB
ECO26_5083
Operon
DOOR ID:
624954
ECO26_5083
(btuB)
,
ECO26_5084
(murI)
View Structure
7
5161690-5161790
(-)
TPP
5159713-5161609 (-)
thiC
ECO26_5103
Operon
DOOR ID:
624959
ECO26_5098
(thiH)
,
ECO26_5099
(thiG)
,
ECO26_5100
(thiS)
,
ECO26_5101
(thiF)
,
ECO26_5102
(thiE)
,
ECO26_5103
(thiC)
View Structure
8
5207301-5207497
(-)
lysine
5205859-5207209 (-)
lysC
ECO26_5139
Single gene
DOOR ID:
2702203
ECO26_5139
(lysC)
View Structure
9
5403091-5403137
(+)
mini-ykkC
5403154-5403472 (+)
sugE
ECO26_5317
Single gene
DOOR ID:
2702286
ECO26_5317
(sugE)
View Structure
10
5498812-5498927
(+)
Mg sensor
5499020-5501717 (+)
mgtA
ECO26_5412
Single gene
DOOR ID:
2702328
ECO26_5412
(mgtA)
View Structure
Genome:
Escherichia coli O26:H11 str. 11368
(
NC_013361.1
);
Phylum:
Gammaproteobacteria
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