Genome: Escherichia coli O103:H2 str. 12009 (NC_013353.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 77228-77327 (-)TPP76213-77197 (-)tbpA

Thiamin transporter subunit TbpA

DOOR ID: 622579
ECO103_0067 (thiQ),
ECO103_0068 (thiP),
ECO103_0069 (tbpA)
View Structure
2 890872-891016 (+)MOCO892014-892527 (+)moaB

Molybdenum cofactor biosynthesis protein B

DOOR ID: 622728
ECO103_0816 (moaA),
ECO103_0817 (moaB),
ECO103_0818 (moaC),
ECO103_0819 (moaD),
ECO103_0820 (moaE)
View Structure
3 2094648-2094749 (+)yybP-ykoY2094879-2095446 (+)yebN

Probable manganese efflux pump MntP
ECO103_2011Single gene

DOOR ID: 2698634
ECO103_2011 (yebN) View Structure
4 2596393-2596489 (-)TPP2595569-2596358 (-)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)

DOOR ID: 623058
ECO103_2577 (yegW),
ECO103_2578 (yegX),
ECO103_2579 (thiD),
ECO103_2580 (thiM)
View Structure
5 3795279-3795427 (-)FMN3794521-3795175 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
ECO103_3720Single gene

DOOR ID: 2699146
ECO103_3720 (ribB) View Structure
6 4873937-4874127 (+)cobalamin4874191-4876036 (+)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)

DOOR ID: 623481
ECO103_4724 (btuB),
ECO103_4725 (murI)
View Structure
7 4905728-4905828 (-)TPP4903751-4905647 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)

DOOR ID: 623486
ECO103_4738 (thiH),
ECO103_4739 (thiG),
ECO103_4740 (thiS),
ECO103_4741 (thiF),
ECO103_4742 (thiE),
ECO103_4743 (thiC)
View Structure
8 4945108-4945304 (-)lysine4943666-4945016 (-)lysC

ECO103_4772Single gene

DOOR ID: 2699511
ECO103_4772 (lysC) View Structure
9 5135423-5135469 (+)mini-ykkC5135486-5135804 (+)sugE

ECO103_4946Single gene

DOOR ID: 2699590
ECO103_4946 (sugE) View Structure
10 5232616-5232731 (+)Mg sensor5232824-5235521 (+)mgtA

Magnesium transporter MgtA
ECO103_5038Single gene

DOOR ID: 2699629
ECO103_5038 (mgtA) View Structure