Genome: Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 (NC_013205.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 264912-264974 (+)fluoride265045-265462 (+)Aaci_0242

Putative fluoride ion transporter CrcB		Aaci_0242Operon

DOOR ID: 615773		Aaci_0242,
Aaci_0243		 View Structure
2 379674-379758 (-)c-di-GMP-II378966-379413 (-)Aaci_0327

Aaci_0327Single gene

DOOR ID: 2684411		Aaci_0327 View Structure
3 446689-446790 (+)purine446951-448481 (+)Aaci_0392

GMP synthase [glutamine-hydrolyzing] (GMP synthetase) (Glutamine amidotransferase)		Aaci_0392Single gene

DOOR ID: 2684427		Aaci_0392 View Structure
4 777895-778027 (+)ydaO-yuaA778183-779578 (+)Aaci_0730

General substrate transporter		Aaci_0730Single gene

DOOR ID: 2684515		Aaci_0730 View Structure
5 822348-822451 (+)ykkC-yxkD822539-823967 (+)Aaci_0763

Amino acid permease-associated region		Aaci_0763Operon

DOOR ID: 615884		Aaci_0763,
Aaci_0764,
Aaci_0765,
Aaci_0766,
Aaci_0767		 View Structure
6 1012791-1012937 (+)FMN1013044-1014160 (+)Aaci_0936

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		Aaci_0936Operon

DOOR ID: 615921		Aaci_0936,
Aaci_0937		 View Structure
7 1018635-1018736 (+)TPP1018829-1019399 (+)Aaci_0944

ABC-type thiamin-related transport system; permease component 1; predicted		Aaci_0944Operon

DOOR ID: 615924		Aaci_0944,
Aaci_0945		 View Structure
8 1116152-1116296 (-)ydaO-yuaA1115609-1116152 (-)Aaci_1050

NLP/P60 protein		Aaci_1050Single gene

DOOR ID: 2684610		Aaci_1050 View Structure
9 1274867-1274948 (+)ZMP-ZTP1275011-1276601 (+)Aaci_1231

D-3-phosphoglycerate dehydrogenase (5)		Aaci_1231Operon

DOOR ID: 615990		Aaci_1231,
Aaci_1232,
Aaci_1233		 View Structure
10 1422606-1422739 (+)ydaO-yuaA1422796-1422931 (+)Aaci_1365

Aaci_1365Single gene

DOOR ID: 2684705		Aaci_1365 View Structure
11 1434094-1434235 (+)ydaO-yuaA1434240-1435029 (+)Aaci_1379

Cell wall hydrolase SleB		Aaci_1379Single gene

DOOR ID: 2684712		Aaci_1379 View Structure
12 1665876-1666083 (+)cobalamin1666272-1668591 (+)Aaci_1599

Ribonucleoside-diphosphate reductase 		Aaci_1599Operon

DOOR ID: 616049		Aaci_1599,
Aaci_1600		 View Structure
13 1981318-1981416 (+)TPP1981458-1982157 (+)Aaci_1931

Aminopyrimidine aminohydrolase 		Aaci_1931Operon

DOOR ID: 616120		Aaci_1931,
Aaci_1932,
Aaci_1933,
Aaci_1934		 View Structure
14 1996500-1996702 (-)cobalamin1995424-1996483 (-)Aaci_1944

Periplasmic binding protein		Aaci_1944Operon

DOOR ID: 616123		Aaci_1943,
Aaci_1944		 View Structure
15 2217361-2217498 (-)FMN2216174-2217155 (-)Aaci_2152

Aaci_2152Single gene

DOOR ID: 2684944		Aaci_2152 View Structure
16 2253654-2253817 (-)ykoK2252089-2253436 (-)Aaci_2190

Natural resistance-associated macrophage protein		Aaci_2190Operon

DOOR ID: 616174		Aaci_2189,
Aaci_2190		 View Structure
17 2735535-2735647 (-)TPP2733649-2735371 (-)Aaci_2653

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		Aaci_2653Single gene

DOOR ID: 2685127		Aaci_2653 View Structure
18 2737395-2737497 (-)purine2735760-2737230 (-)Aaci_2654

Permease for cytosine/purines uracil thiamine allantoin		Aaci_2654Single gene

DOOR ID: 2685128		Aaci_2654 View Structure
19 2751441-2751601 (-)glmS2749594-2751424 (-)Aaci_2669

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		Aaci_2669Single gene

DOOR ID: 2685134		Aaci_2669 View Structure
20 2899646-2899726 (+)ZMP-ZTP2899816-2900674 (+)Aaci_2840

Bifunctional protein FolD [Includes: Methenyltetrahydrofolate cyclohydrolase ]		Aaci_2840Single gene

DOOR ID: 2685174		Aaci_2840 View Structure