RiboswitchDB

Genome: Atopobium parvulum DSM 20469 (NC_013203.1); Phylum: Actinobacteria

S.No.	Riboswitch Location and Strand	Riboswitch class	Downstream gene location and Strand	Downstream gene name/gene product description	Locus_tag of downstream gene	Single gene/within operon (According to DOOR database)	Operon details (List of genes within operon and their Locus_tag)	Predicted Structure
1	407303-407468 (-)	FMN	406709-407297 (-)	Apar_0354 Riboflavin transporter	Apar_0354	Operon DOOR ID: 614871	Apar_0352, Apar_0353, Apar_0354	View Structure
2	452381-452492 (+)	TPP	452513-453287 (+)	Apar_0391 Binding-protein-dependent transport systems inner membrane component	Apar_0391	Operon DOOR ID: 614879	Apar_0391, Apar_0392, Apar_0393	View Structure
3	592745-592909 (+)	lysine	592940-594245 (+)	Apar_0514 Diaminopimelate decarboxylase (0)	Apar_0514	Operon DOOR ID: 614906	Apar_0514, Apar_0515, Apar_0516	View Structure

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

407303-407468 (-)

FMN

406709-407297 (-)

Apar_0354

Riboflavin transporter

Apar_0354

Operon

DOOR ID: 614871

Apar_0352,
Apar_0353,
Apar_0354

View Structure

452381-452492 (+)

TPP

452513-453287 (+)

Apar_0391

Binding-protein-dependent transport systems inner membrane component

Apar_0391

Operon

DOOR ID: 614879

Apar_0391,
Apar_0392,
Apar_0393

View Structure

592745-592909 (+)

lysine

592940-594245 (+)

Apar_0514

Diaminopimelate decarboxylase (0)

Apar_0514

Operon

DOOR ID: 614906

Apar_0514,
Apar_0515,
Apar_0516

View Structure

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";}}