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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
118962-119141
(-)
lysine
117517-118861 (-)
lysA
LGG_00112
Operon
DOOR ID:
612913
LGG_00110
(hipO)
,
LGG_00111
(dapD)
,
LGG_00112
(lysA)
View Structure
2
371671-371760
(+)
TPP
371960-372527 (+)
LGG_00363
LGG_00363
Operon
DOOR ID:
612967
LGG_00363,
LGG_00364
(cbiO)
,
LGG_00365
(cbiQ)
View Structure
3
849596-849683
(+)
SMK_box
850987-852481 (+)
mdr
LGG_00843
Single gene
DOOR ID:
2679041
LGG_00843
(mdr)
View Structure
4
1315291-1315454
(+)
ykoK
1315667-1316483 (+)
LGG_01319
LGG_01319
Single gene
DOOR ID:
2679215
LGG_01319
View Structure
5
1385259-1385380
(+)
FMN
1385478-1386057 (+)
LGG_01383
LGG_01383
Single gene
DOOR ID:
2679236
LGG_01383
View Structure
6
1844705-1844802
(-)
TPP
1844057-1844663 (-)
LGG_01815
LGG_01815
Single gene
DOOR ID:
2679355
LGG_01815
View Structure
7
1938738-1938913
(-)
lysine
1936706-1938170 (-)
lysP
LGG_01896
Single gene
DOOR ID:
2679399
LGG_01896
(lysP)
View Structure
8
2110807-2110931
(-)
preQ1-II
2110306-2110807 (-)
ccl
LGG_02057
Single gene
DOOR ID:
2679478
LGG_02057
(ccl)
View Structure
9
2322774-2322868
(-)
THF
2322217-2322736 (-)
LGG_02255
LGG_02255
Single gene
DOOR ID:
2679553
LGG_02255
View Structure
10
2502469-2502523
(-)
fluoride
2501989-2502400 (-)
LGG_02431
LGG_02431
Operon
DOOR ID:
613408
LGG_02430,
LGG_02431
View Structure
11
2910844-2911017
(+)
lysine
2911123-2912722 (+)
glnP
LGG_02848
Operon
DOOR ID:
613494
LGG_02848
(glnP)
,
LGG_02849
(glnQ)
View Structure
Genome:
Lactobacillus rhamnosus GG
(
NC_013198.1
);
Phylum:
Firmicutes
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