Genome: Jonesia denitrificans DSM 20603 (NC_013174.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 97612-97720 (+)TPP97822-98506 (+)Jden_0088

YKOF domain protein
Jden_0088Single gene

DOOR ID: 2675711
Jden_0088 View Structure
2 206306-206413 (-)SAM205278-206298 (-)Jden_0190

Methylenetetrahydrofolate reductase (0)
Jden_0190Operon

DOOR ID: 610889
Jden_0189,
Jden_0190,
Jden_0191
View Structure
3 334507-334610 (+)TPP334654-335746 (+)Jden_0314

ABC transporter; periplasmic binding protein; thiB subfamily
Jden_0314Operon

DOOR ID: 610917
Jden_0314,
Jden_0315,
Jden_0316,
Jden_0317
View Structure
4 729244-729330 (+)ZMP-ZTP729391-730993 (+)Jden_0678

Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (0) (ATIC) (IMP synthase) (Inosinicase)]
Jden_0678Single gene

DOOR ID: 2675907
Jden_0678 View Structure
5 732489-732622 (+)FMN732769-733834 (+)Jden_0680

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
Jden_0680Operon

DOOR ID: 610995
Jden_0680,
Jden_0681,
Jden_0682,
Jden_0683,
Jden_0684
View Structure
6 747589-747697 (+)ZMP-ZTP747799-749089 (+)Jden_0694

Serine hydroxymethyltransferase (SHMT) (Serine methylase)
Jden_0694Operon

DOOR ID: 610998
Jden_0694,
Jden_0695,
Jden_0696
View Structure
7 1249348-1249415 (+)ykkC-III1249425-1249743 (+)Jden_1174

Jden_1174operon

DOOR ID: 611111
Jden_1174,
Jden_1175
View Structure
8 1254731-1254825 (+)TPP1254873-1255647 (+)Jden_1181

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
Jden_1181Operon

DOOR ID: 611113
Jden_1181,
Jden_1182,
Jden_1183
View Structure
9 1744459-1744566 (-)TPP1742187-1743129 (+)Jden_1616

Jden_1616Single gene

DOOR ID: 2676171
Jden_1616 View Structure
10 2088246-2088420 (-)ykoK2086826-2088164 (-)Jden_1907

Magnesium transporter MgtE
Jden_1907Single gene

DOOR ID: 2676282
Jden_1907 View Structure
11 2182022-2182209 (-)ydaO-yuaA2181203-2182019 (-)Jden_1987

NLP/P60 protein
Jden_1987Single gene

DOOR ID: 2676314
Jden_1987 View Structure
12 2557291-2557408 (-)SAM-IV2555736-2557173 (-)Jden_2391

Cysteine desulfurase
Jden_2391Single gene

DOOR ID: 2676416
Jden_2391 View Structure
13 2557521-2557618 (+)SAM2557623-2558049 (+)Jden_2392

Rhodanese domain protein
Jden_2392Operon

DOOR ID: 611373
Jden_2392,
Jden_2393,
Jden_2394,
Jden_2395
View Structure
14 2602461-2602632 (+)ydaO-yuaA2602649-2603486 (+)Jden_2429

NLP/P60 protein
Jden_2429Single gene

DOOR ID: 2676431
Jden_2429 View Structure