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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
854854-854955
(-)
TPP
854568-854769 (-)
Dbac_0777
Thiamine biosynthesis protein ThiS
Dbac_0777
Operon
DOOR ID:
610280
Dbac_0773,
Dbac_0774,
Dbac_0775,
Dbac_0776,
Dbac_0777
View Structure
2
935541-935689
(-)
FMN
934814-935471 (-)
Dbac_0862
3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
Dbac_0862
Single gene
DOOR ID:
2674786
Dbac_0862
View Structure
3
1013571-1013664
(-)
TPP
1012696-1013512 (-)
Dbac_0930
Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
Dbac_0930
Operon
DOOR ID:
610307
Dbac_0926,
Dbac_0927,
Dbac_0928,
Dbac_0929,
Dbac_0930
View Structure
4
1947926-1948106
(+)
cobalamin
1948192-1949074 (+)
Dbac_1710
Sirohydrochlorin cobaltochelatase
Dbac_1710
Operon
DOOR ID:
610466
Dbac_1710,
Dbac_1711,
Dbac_1712,
Dbac_1713,
Dbac_1714,
Dbac_1715,
Dbac_1716,
Dbac_1717,
Dbac_1718,
Dbac_1719
View Structure
5
2857783-2857863
(-)
ykkC-yxkD
2857029-2857374 (+)
Dbac_2489
Monovalent cation/proton antiporter; MnhG/PhaG subunit
Dbac_2489
Operon
DOOR ID:
610621
Dbac_2484,
Dbac_2485,
Dbac_2486,
Dbac_2487,
Dbac_2488,
Dbac_2489,
Dbac_2490
View Structure
6
3832408-3832580
(+)
cobalamin
3832644-3833283 (+)
Dbac_3396
Radical SAM domain protein
Dbac_3396
Single gene
DOOR ID:
2675634
Dbac_3396
View Structure
Genome:
Desulfomicrobium baculatum DSM 4028
(
NC_013173.1
);
Phylum:
delta/epsilon subdivisions
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