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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
5662-5791
(+)
FMN
5919-6987 (+)
Bfae_00060
Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
Bfae_00060
Operon
DOOR ID:
609442
Bfae_00060,
Bfae_00070,
Bfae_00080,
Bfae_00090
View Structure
2
196476-196579
(-)
TPP
195077-195320 (-)
Bfae_01730
Thiamine biosynthesis protein ThiS
Bfae_01730
Operon
DOOR ID:
609470
Bfae_01710,
Bfae_01720,
Bfae_01730,
Bfae_01740
View Structure
3
196672-196765
(+)
TPP
197010-197811 (+)
Bfae_01770
Bfae_01770
Operon
DOOR ID:
609471
Bfae_01770,
Bfae_01780
View Structure
4
1333548-1333655
(-)
TPP
1332921-1333503 (-)
Bfae_11760
Predicted membrane protein
Bfae_11760
Single gene
DOOR ID:
2673846
Bfae_11760
View Structure
5
1814222-1814339
(-)
FMN
1813420-1814128 (-)
Bfae_16090
Nicotinamide mononucleotide transporter PnuC
Bfae_16090
Single gene
DOOR ID:
2673974
Bfae_16090
View Structure
6
2616024-2616132
(-)
TPP
2615279-2615984 (-)
Bfae_23340
YKOF-like protein
Bfae_23340
Operon
DOOR ID:
609921
Bfae_23320,
Bfae_23330,
Bfae_23340
View Structure
7
2694704-2694780
(-)
ZMP-ZTP
2693007-2694675 (-)
Bfae_24100
Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (0) (ATIC) (IMP synthase) (Inosinicase)]
Bfae_24100
Operon
DOOR ID:
609940
Bfae_24100,
Bfae_24110
View Structure
8
2745350-2745394
(+)
mini-ykkC
2745409-2746732 (+)
Bfae_24550
Bfae_24550
Operon
DOOR ID:
609948
Bfae_24550,
Bfae_24560
View Structure
9
3057753-3057845
(+)
TPP
3057910-3059710 (+)
Bfae_27340
Phosphomethylpyrimidine kinase
Bfae_27340
Operon
DOOR ID:
610007
Bfae_27340,
Bfae_27350,
Bfae_27360,
Bfae_27370
(thiE)
View Structure
Genome:
Brachybacterium faecium DSM 4810
(
NC_013172.1
);
Phylum:
Actinobacteria
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