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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
126963-127097
(+)
TPP
127170-129018 (+)
Kkor_0126
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Kkor_0126
Operon
DOOR ID:
607751
Kkor_0126,
Kkor_0127,
Kkor_0128
View Structure
2
1233109-1233238
(+)
TPP
1233396-1235589 (+)
Kkor_1154
TonB-dependent receptor
Kkor_1154
Operon
DOOR ID:
607958
Kkor_1154,
Kkor_1155,
Kkor_1156,
Kkor_1157
View Structure
3
1730211-1730437
(-)
cobalamin
1728160-1730125 (-)
Kkor_1604
TonB-dependent receptor plug
Kkor_1604
Operon
DOOR ID:
608046
Kkor_1602,
Kkor_1603,
Kkor_1604
View Structure
4
1941314-1941358
(+)
mini-ykkC
1941380-1941698 (+)
Kkor_1793
Kkor_1793
Single gene
DOOR ID:
2671306
Kkor_1793
View Structure
5
1944023-1944067
(+)
mini-ykkC
1944088-1944406 (+)
Kkor_1797
Kkor_1797
Single gene
DOOR ID:
2671310
Kkor_1797
View Structure
Genome:
Kangiella koreensis DSM 16069
(
NC_013166.1
);
Phylum:
Gammaproteobacteria
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