RiboswitchDB

Genome: Acidimicrobium ferrooxidans DSM 10331 (NC_013124.1); Phylum: Actinobacteria

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

281279-281359 (-)

SAH

276606-281163 (-)

Afer_0272

NAD-glutamate dehydrogenase

Single gene

DOOR ID: 2655369

Afer_0272

2

460265-460330 (+)

SAH

462016-463270 (+)

Afer_0462

UDP-sulfoquinovose synthase

Operon

DOOR ID: 600694

Afer_0462,
Afer_0463,
Afer_0464,
Afer_0465,
Afer_0466,
Afer_0467

3

1935293-1935400 (-)

SAM

1933740-1934031 (-)

Afer_1847

ThiamineS protein

Operon

DOOR ID: 600968

Afer_1847,
Afer_1848

4

1945683-1945787 (+)

TPP

1947800-1948745 (+)

Afer_1860

Single gene

DOOR ID: 2655713

Afer_1860

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