Genome: Methylovorus glucosetrophus SIP3-4 (NC_012969.1); Phylum: Betaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 8565-8629 (-)fluoride8106-8490 (-)Msip34_0007

Putative fluoride ion transporter CrcB

DOOR ID: 1309324
View Structure
2 111009-111093 (+)c-di-GMP-I111193-112441 (+)Msip34_0093

Uncharacterized protein
Msip34_0093single gene

DOOR ID: 2631936
Msip34_0093 View Structure
3 182302-182509 (-)cobalamin180320-182195 (-)Msip34_0154

TonB-dependent receptor
Msip34_0154Single gene

DOOR ID: 2631952
Msip34_0154 View Structure
4 185436-185652 (-)cobalamin183369-185286 (-)Msip34_0156

TonB-dependent receptor plug
Msip34_0156Single gene

DOOR ID: 2631954
Msip34_0156 View Structure
5 206496-206579 (+)SAH206668-208078 (+)Msip34_0178

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
Msip34_0178Single gene

DOOR ID: 2631967
Msip34_0178 View Structure
6 417440-417524 (-)c-di-GMP-I415755-417177 (-)Msip34_0404

Diguanylate phosphodiesterase
Msip34_0404single gene

DOOR ID: 2632016
Msip34_0404 View Structure
7 1002410-1002454 (+)mini-ykkC1002467-1006094 (+)Msip34_0953

Msip34_0953Single gene

DOOR ID: 2632153
Msip34_0953 View Structure
8 1156905-1157162 (+)cobalamin1157305-1160119 (+)Msip34_1087

Ribonucleoside-diphosphate reductase

DOOR ID: 1309555
View Structure
9 1198186-1198230 (-)mini-ykkC1197857-1198172 (-)Msip34_1120

Msip34_1120Single gene

DOOR ID: 2632223
Msip34_1120 View Structure
10 2086268-2086464 (+)cobalamin2086579-2088676 (+)Msip34_1963

TonB-dependent siderophore receptor
Msip34_1963Single gene

DOOR ID: 2632498
Msip34_1963 View Structure
11 2756716-2756827 (-)TPP2754764-2756648 (-)Msip34_2617

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Msip34_2617Single gene

DOOR ID: 2632725
Msip34_2617 View Structure