Genome: Escherichia coli B str. REL606 (NC_012967.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 78315-78414 (-)TPP77300-78284 (-)tbpA


DOOR ID: 1183273
ECB_00070 (tbpA),
ECB_00069 (thiP),
ECB_00068 (thiQ)
View Structure
2 809538-809682 (+)MOCO810680-811193 (+)moaB


DOOR ID: 1183423
ECB_00748 (moaA),
ECB_00749 (moaB),
ECB_00750 (moaC),
ECB_00751 (moaD),
ECB_00752 (moaE)
View Structure
3 1884035-1884136 (+)yybP-ykoY1884266-1884833 (+)yebN

ECB_01791Single gene

DOOR ID: 2630195
ECB_01791 (yebN) View Structure
4 2139465-2139561 (-)TPP2138641-2139430 (-)thiM


DOOR ID: 1183668
ECB_02029 (yegW),
ECB_02030 (yegX),
ECB_02031 (thiD),
ECB_02032 (thiM)
View Structure
5 3118742-3118890 (-)FMN3117984-3118638 (-)ribB

ECB_02913Single gene

DOOR ID: 2630541
ECB_02913 (ribB) View Structure
6 4143245-4143435 (+)cobalamin4143499-4145344 (+)btuB


DOOR ID: 1184048
ECB_03851 (btuB),
ECB_03852 (murI)
View Structure
7 4175791-4175891 (-)TPP4173814-4175710 (-)thiC


DOOR ID: 1184053
ECB_03866 (thiH),
ECB_03867 (thiG),
ECB_03868 (thiS),
ECB_03869 (thiF),
ECB_03870 (thiE),
ECB_03871 (thiC)
View Structure
8 4212256-4212452 (-)lysine4210814-4212164 (-)lysC

ECB_03896Single gene

DOOR ID: 2630883
ECB_03896 (lysC) View Structure
9 4355522-4355568 (+)mini-ykkC4355585-4355903 (+)sugE

ECB_04020Single gene

DOOR ID: 2630938
ECB_04020 (sugE) View Structure
10 4450693-4450808 (+)Mg sensor4450901-4453598 (+)mgtA

ECB_04110Single gene

DOOR ID: 2630976
ECB_04110 (mgtA) View Structure