Genome: Escherichia coli 'BL21-Gold(DE3)pLysS AG' (NC_012947.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 721649-721797 (+)FMN721900-722554 (+)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)		ECBD_0698Single gene

DOOR ID: 2626342		ECBD_0698 (ribB) View Structure
2 1656581-1656677 (+)TPP1656711-1657500 (+)ECBD_1553

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)		ECBD_1553Operon

DOOR ID: 588137		ECBD_1553,
ECBD_1554,
ECBD_1555,
ECBD_1556		 View Structure
3 1931195-1931296 (-)yybP-ykoY1930497-1931064 (-)ECBD_1820

Probable manganese efflux pump MntP		ECBD_1820Single gene

DOOR ID: 2626686		ECBD_1820 View Structure
4 2981336-2981480 (-)MOCO2979824-2980337 (-)ECBD_2841

Molybdenum cofactor biosynthesis protein B		ECBD_2841Operon

DOOR ID: 588368		ECBD_2838 (moaE),
ECBD_2839 (moaD),
ECBD_2840 (moaC),
ECBD_2841,
ECBD_2842 (moaA)		 View Structure
5 3705307-3705406 (+)TPP3705436-3706420 (+)tbpA

Thiamine ABC transporter; periplasmic binding protein		ECBD_3549Operon

DOOR ID: 588512		ECBD_3549 (tbpA),
ECBD_3550 (thiP),
ECBD_3551 (thiQ)		 View Structure
6 3963300-3963415 (-)Mg sensor3960509-3963206 (-)ECBD_3791

Magnesium-translocating P-type ATPase 		ECBD_3791Single gene

DOOR ID: 2627426		ECBD_3791 View Structure
7 4058540-4058586 (-)mini-ykkC4058204-4058522 (-)ECBD_3881

ECBD_3881Single gene

DOOR ID: 2627467		ECBD_3881 View Structure
8 4201581-4201777 (+)lysine4201868-4203218 (+)ECBD_4013

Aspartokinase 		ECBD_4013Single gene

DOOR ID: 2627529		ECBD_4013 View Structure
9 4238142-4238242 (+)TPP4238322-4240218 (+)ECBD_4038

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		ECBD_4038Operon

DOOR ID: 588611		ECBD_4038,
ECBD_4039,
ECBD_4040,
ECBD_4041,
ECBD_4042 (thiG),
ECBD_4043 (thiH)		 View Structure
10 4270597-4270787 (-)cobalamin4267885-4268743 (-)ECBD_4057

Glutamate racemase 		ECBD_4057Single gene

DOOR ID: 2627546		ECBD_4057 View Structure