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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
125904-126048
(+)
THF
126091-126643 (+)
SSUBM407_0132
Putative membrane protein
SSUBM407_0132
Single gene
DOOR ID:
2624092
SSUBM407_0132
View Structure
2
238355-238459
(+)
glycine
238565-239900 (+)
SSUBM407_0221
Sodium:alanine symporter family protein
SSUBM407_0221
Single gene
DOOR ID:
2624126
SSUBM407_0221
View Structure
3
585810-585905
(-)
TPP
585202-585751 (-)
SSUBM407_0530
Putative membrane protein
SSUBM407_0530
Single gene
DOOR ID:
2624238
SSUBM407_0530
View Structure
4
1225591-1225680
(-)
TPP
1224608-1225256 (-)
thiD
Putative phosphatase
SSUBM407_1147
Operon
DOOR ID:
586690
SSUBM407_1144
(thiE)
,
SSUBM407_1145
(thiM)
,
SSUBM407_1146
(thiD)
,
SSUBM407_1147
View Structure
5
1584067-1584169
(-)
preQ1-II
1582595-1583438 (-)
SSUBM407_1503
Aldo/keto reductase family protein
SSUBM407_1503
Single gene
DOOR ID:
2624522
SSUBM407_1503
View Structure
6
1658814-1659028
(-)
FMN
1658197-1658755 (-)
SSUBM407_1580
Riboflavin transporter
SSUBM407_1580
Operon
DOOR ID:
586779
SSUBM407_1579,
SSUBM407_1580
View Structure
Genome:
Streptococcus suis BM407
(
NC_012926.1
);
Phylum:
Firmicutes
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