RiboswitchDB

Genome: Streptococcus suis SC84 (NC_012924.1); Phylum: Firmicutes

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

125741-125885 (+)

THF

125929-126481 (+)

SSUSC84_0130

Single gene

DOOR ID: 2622897

SSUSC84_0130

2

236089-236193 (+)

glycine

236299-237634 (+)

SSUSC84_0219

Single gene

DOOR ID: 2622931

SSUSC84_0219

3

505676-505771 (-)

TPP

505068-505617 (-)

SSUSC84_0458

Single gene

DOOR ID: 2623023

SSUSC84_0458

4

712688-712777 (+)

TPP

713111-713759 (+)

SSUSC84_0650

Operon

DOOR ID: 585723

SSUSC84_0650,
SSUSC84_0651 (thiD),
SSUSC84_0652 (thiM),
SSUSC84_0653 (thiE)

5

1533728-1533830 (-)

preQ1-II

1532256-1533099 (-)

SSUSC84_1456

Single gene

DOOR ID: 2623302

SSUSC84_1456

6

1608475-1608689 (-)

FMN

1607858-1608416 (-)

SSUSC84_1532

Operon

DOOR ID: 585920

SSUSC84_1531,
SSUSC84_1532

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