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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
229326-229370
(+)
PreQ1
229373-230045 (+)
NT05HA_0238
NT05HA_0238
Single gene
DOOR ID:
2616143
NT05HA_0238
View Structure
2
393136-393180
(-)
PreQ1
392606-393032 (-)
NT05HA_0382
NT05HA_0382
Operon
DOOR ID:
582287
NT05HA_0381,
NT05HA_0382
View Structure
3
532132-532219
(+)
TPP
532342-533146 (+)
NT05HA_0532
NT05HA_0532
Operon
DOOR ID:
582309
NT05HA_0532,
NT05HA_0533,
NT05HA_0534
(thiP)
,
NT05HA_0535,
NT05HA_0536
View Structure
4
860557-860703
(-)
MOCO
859011-859500 (-)
NT05HA_0847
NT05HA_0847
Operon
DOOR ID:
582368
NT05HA_0845,
NT05HA_0846,
NT05HA_0847,
NT05HA_0848
(moaA)
View Structure
5
899177-899351
(+)
lysine
899449-900979 (+)
NT05HA_0885
NT05HA_0885
Single gene
DOOR ID:
2616373
NT05HA_0885
View Structure
6
1237486-1237587
(+)
TPP
1237674-1238730 (+)
NT05HA_1226
NT05HA_1226
Single gene
DOOR ID:
2616487
NT05HA_1226
View Structure
7
1474984-1475099
(+)
glycine
1475202-1476576 (+)
NT05HA_1471
NT05HA_1471
Operon
DOOR ID:
582494
NT05HA_1471,
NT05HA_1472
View Structure
8
1767851-1767949
(+)
TPP
1768018-1768681 (+)
NT05HA_1780
NT05HA_1780
Single gene
DOOR ID:
2616652
NT05HA_1780
View Structure
9
1857096-1857266
(-)
FMN
1856356-1857001 (-)
ribB
NT05HA_1865
Single gene
DOOR ID:
2616677
NT05HA_1865
(ribB)
View Structure
Genome:
Aggregatibacter aphrophilus NJ8700
(
NC_012913.1
);
Phylum:
Gammaproteobacteria
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