Genome: Desulfovibrio salexigens DSM 2638 (NC_012881.1); Phylum: delta/epsilon subdivisions
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 905863-906057 (+)cobalamin906128-908402 (+)Desal_0813

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)
Desal_0813Operon

DOOR ID: 579005
Desal_0813,
Desal_0814
View Structure
2 926568-926703 (-)cobalamin923626-926311 (-)Desal_0826

Vitamin B12-dependent ribonucleotide reductase
Desal_0826Single gene

DOOR ID: 2610655
Desal_0826 View Structure
3 963659-963759 (-)SAM963119-963443 (-)Desal_0862

Desal_0862Single gene

DOOR ID: 2610665
Desal_0862 View Structure
4 1435237-1435325 (+)ZMP-ZTP1435378-1436635 (+)Desal_1305

Serine hydroxymethyltransferase (SHMT) (Serine methylase)
Desal_1305Single gene

DOOR ID: 2610831
Desal_1305 View Structure
5 2309810-2309963 (-)FMN2309050-2309704 (-)Desal_2097

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
Desal_2097Single gene

DOOR ID: 2611096
Desal_2097 View Structure
6 2535550-2535753 (-)cobalamin2534545-2535448 (-)Desal_2307

Sirohydrochlorin cobaltochelatase
Desal_2307Operon

DOOR ID: 579309
Desal_2303,
Desal_2304,
Desal_2305,
Desal_2306,
Desal_2307
View Structure
7 2899058-2899160 (+)TPP2899218-2899419 (+)Desal_2647

Thiamine biosynthesis protein ThiS
Desal_2647Operon

DOOR ID: 579387
Desal_2647,
Desal_2648,
Desal_2649 (thiH),
Desal_2650,
Desal_2651
View Structure
8 3932683-3932827 (-)cobalamin3930347-3932408 (-)Desal_3514

Anaerobic ribonucleoside-triphosphate reductase
Desal_3514Single gene

DOOR ID: 2611684
Desal_3514 View Structure