RiboswitchDB

Genome: Ralstonia pickettii 12D chromosome II (NC_012857.1); Phylum: Betaproteobacteria

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

592437-592517 (-)

c-di-GMP-I

591520-592375 (-)

Rpic12D_4013

Putative signal peptide protein

single gene

DOOR ID: 2608185

Rpic12D_4013

2

691128-691205 (+)

fluoride

691282-692563 (+)

Rpic12D_4094

Chloride channel core

Single gene

DOOR ID: 2608222

Rpic12D_4094

3

912076-912231 (+)

FMN

912357-913083 (+)

ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)

Single gene

DOOR ID: 2608303

Rpic12D_4301 (ribB)

4

943992-944061 (+)

SAH

944819-945323 (+)

Rpic12D_4328

Operon

DOOR ID: 577909

Rpic12D_4328,
Rpic12D_4329,
Rpic12D_4330

5

1049933-1050038 (-)

glycine

1048533-1049787 (-)

Rpic12D_4417

D-amino-acid dehydrogenase

Single gene

DOOR ID: 2608354

Rpic12D_4417

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";}}