Genome: Vibrio cholerae O395 chromosome I (NC_012582.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 5702-5926 (-)cobalamin3822-5658 (-)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)
VC395_0005Single gene

DOOR ID: 2552550
VC395_0005 (btuB) View Structure
2 116739-116837 (-)TPP114700-116638 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)

DOOR ID: 1308797
VC395_0119 (thiC),
VC395_0118 (thiE),
VC395_0117 (thiF),
VC395_0116 (thiS),
VC395_0115 (thiG),
VC395_0114 (thiH)
View Structure
3 156485-156594 (-)yybP-ykoY155837-156440 (-)VC395_0158

VC395_0158Single gene

DOOR ID: 2552616
VC395_0158 View Structure
4 463690-463867 (-)lysine462223-463663 (-)lysC

VC395_0435Single gene

DOOR ID: 2552695
VC395_0435 (lysC) View Structure
5 1115172-1115311 (+)MOCO1116348-1116861 (+)moaB


DOOR ID: 1308981
VC395_1038 (moaA),
VC395_1039 (moaB),
VC395_1040 (moaC),
VC395_1041 (moaD),
VC395_1042 (moaE)
View Structure
6 1254992-1255174 (+)lysine1255289-1256891 (+)VC395_1198

VC395_1198Single gene

DOOR ID: 2552976
VC395_1198 View Structure
7 1464782-1464892 (+)TPP1464951-1465800 (+)thiD

VC395_1415Single gene

DOOR ID: 2553056
VC395_1415 (thiD) View Structure
8 1574646-1574693 (+)mini-ykkC1574709-1575024 (+)sugE

VC395_1512Single gene

DOOR ID: 2553103
VC395_1512 (sugE) View Structure
9 1610260-1610359 (-)glycine1608796-1610167 (-)VC395_1541

VC395_1541Single gene

DOOR ID: 2553114
VC395_1541 View Structure
10 1870547-1870716 (+)ykoK1870815-1872171 (+)mgtE-1

VC395_1772Single gene

DOOR ID: 2553192
VC395_1772 (mgtE-1) View Structure
11 1945221-1945307 (+)c-di-GMP-I1945420-1946008 (+)VC395_1839

VC395_1839single gene

DOOR ID: 2553220
VC395_1839 View Structure
12 2806990-2807127 (-)TPP2805933-2806926 (-)tbpA


DOOR ID: 1309286
VC395_2652 (tbpA),
VC395_2654 (ubiX),
VC395_2655 (mpl)
View Structure