Genome: Rhodococcus erythropolis PR4 DNA (NC_012490.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 626777-626891 (+)SAM-IV626944-628270 (+)RER_05540

Putative cysteine desulfurase 		RER_05540Single gene

DOOR ID: 2534418		RER_05540 View Structure
2 663542-663715 (+)ykoK664062-666756 (+)mgtB

Magnesium-transporting ATPase 		RER_05880Operon

DOOR ID: 542673		RER_05880 (mgtB),
RER_05890 (mgtC)		 View Structure
3 742867-743006 (-)cobalamin742647-742842 (-)RER_06630

RER_06630Operon

DOOR ID: 542691		RER_06620,
RER_06630		 View Structure
4 826623-826706 (+)fluoride826874-827363 (+)RER_07430

RER_07430Operon

DOOR ID: 542702		RER_07380,
RER_07390,
RER_07400,
RER_07410,
RER_07420,
RER_07430		 View Structure
5 1097812-1097877 (-)ykkC-III1097482-1097797 (-)RER_09840

RER_09840operon

DOOR ID: 542756		RER_09830,
RER_09840		 View Structure
6 1221239-1221376 (+)cobalamin1222495-1223314 (+)RER_10980

Putative ABC transporter ATP-binding protein		RER_10980Operon

DOOR ID: 542785		RER_10970,
RER_10980,
RER_10990,
RER_11000		 View Structure
7 1326396-1326577 (-)cobalamin1324571-1325324 (-)RER_11930

Putative methyltransferase 		RER_11930Operon

DOOR ID: 542805		RER_11910,
RER_11920,
RER_11930,
RER_11940		 View Structure
8 1586881-1586975 (+)SAM1587166-1588141 (+)RER_14530

Putative ABC transporter permease protein		RER_14530Operon

DOOR ID: 542860		RER_14530,
RER_14540,
RER_14550,
RER_14560,
RER_14570		 View Structure
9 1591666-1591760 (+)SAM1591995-1593633 (+)RER_14580

Putative ABC transporter substrate-binding protein		RER_14580Operon

DOOR ID: 542861		RER_14580,
RER_14590,
RER_14600,
RER_14610,
RER_14620,
RER_14630,
RER_14640,
RER_14650,
RER_14660		 View Structure
10 1615848-1615994 (+)TPP1617069-1617285 (+)thiS

Putative thiamine biosynthesis protein ThiS		RER_14810Operon

DOOR ID: 542865		RER_14800 (thiO),
RER_14810 (thiS),
RER_14820 (thiG),
RER_14830,
RER_14840		 View Structure
11 1624921-1625029 (-)TPP1622459-1623302 (-)thiD

Phosphomethylpyrimidine kinase 		RER_14870Operon

DOOR ID: 542866		RER_14870 (thiD),
RER_14880 (thiC)		 View Structure
12 2160502-2160648 (+)cobalamin2161755-2162796 (+)RER_19750

Putative ABC transporter permease protein		RER_19750Operon

DOOR ID: 542979		RER_19750,
RER_19760,
RER_19770		 View Structure
13 2193160-2193300 (-)SAM-IV2191690-2193016 (-)metY

O-acetylhomoserine (Thiol)-lyase (9)		RER_20030Operon

DOOR ID: 542987		RER_20020 (metX),
RER_20030 (metY)		 View Structure
14 2798399-2798563 (+)AdoCbl2798596-2800537 (+)RER_26060

Putative magnesium chelatase subunit		RER_26060Operon

DOOR ID: 543129		RER_26060,
RER_26070 (cobO),
RER_26080 (cobB)		 View Structure
15 3410698-3410783 (-)cobalamin3407013-3410682 (-)cobN

Putative cobaltochelatase CobN subunit 		RER_31410Single gene

DOOR ID: 2535304		RER_31410 (cobN) View Structure
16 3496228-3496357 (-)glycine3493315-3496174 (-)gcvP

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))		RER_32200Single gene

DOOR ID: 2535325		RER_32200 (gcvP) View Structure
17 3496361-3496500 (-)glycine3493315-3496174 (-)gcvP

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))		RER_32200Single gene

DOOR ID: 2535325		RER_32200 (gcvP) View Structure
18 3628883-3628963 (-)ZMP-ZTP3627888-3628800 (-)folD

Bifunctional protein FolD [Includes: Methenyltetrahydrofolate cyclohydrolase ]		RER_33430Single gene

DOOR ID: 2535358		RER_33430 (folD) View Structure
19 3935362-3935540 (-)ydaO-yuaA3934789-3935347 (-)RER_35900

RER_35900Single gene

DOOR ID: 2535441		RER_35900 View Structure
20 3948494-3948547 (+)SAH3949199-3950177 (-)adoK

Adenosine kinase (0)		RER_36040Single gene

DOOR ID: 2535448		RER_36040 (adoK) View Structure
21 4059541-4059634 (+)TPP4060415-4061696 (+)RER_37180

Putative FMNH2-dependent monooxygenase		RER_37180Single gene

DOOR ID: 2535499		RER_37180 View Structure
22 4391932-4392027 (+)TPP4392757-4393786 (+)RER_40090

Putative ABC transporter substrate-binding protein		RER_40090Operon

DOOR ID: 543436		RER_40080,
RER_40090,
RER_40100,
RER_40110		 View Structure
23 4456132-4456245 (-)SAM-IV4454802-4456044 (-)RER_40640

RER_40640Operon

DOOR ID: 543448		RER_40630,
RER_40640		 View Structure
24 5078947-5079167 (+)ydaO-yuaA5079175-5079739 (+)rpf

Probable resuscitation-promoting factor		RER_46390Single gene

DOOR ID: 2535856		RER_46390 (rpf) View Structure
25 5154531-5154732 (+)cobalamin5154890-5157155 (+)metE

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)		RER_47140Single gene

DOOR ID: 2535880		RER_47140 (metE) View Structure
26 5227072-5227167 (-)SAM5225987-5227067 (-)RER_47710

RER_47710Operon

DOOR ID: 543599		RER_47690,
RER_47700,
RER_47710		 View Structure