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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
654256-654493
(-)
cobalamin
651724-654070 (-)
ACP_0571
TonB-dependent receptor
ACP_0571
Single gene
DOOR ID:
2530625
ACP_0571
View Structure
2
2470423-2470618
(-)
cobalamin
2467942-2470321 (-)
ACP_2111
Ribonucleoside-diphosphate reductase
ACP_2111
Operon
DOOR ID:
1181617
ACP_2110,
ACP_2111
View Structure
3
3403955-3404157
(-)
cobalamin
3401551-3403828 (-)
metE
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)
ACP_2931
Single gene
DOOR ID:
2531714
ACP_2931
(metE)
View Structure
4
3489826-3489898
(+)
glutamine
3490300-3491002 (+)
ACP_3011
ACP_3011
Operon
DOOR ID:
1181785
ACP_3008
(serS)
,
ACP_3009,
ACP_3011
View Structure
5
3843421-3843494
(-)
fluoride
3842989-3843367 (-)
crcB
Putative fluoride ion transporter CrcB
ACP_3316
Single gene
DOOR ID:
2531882
ACP_3316
(crcB)
View Structure
6
3934139-3934250
(+)
SAM
3934403-3935675 (+)
thrC2
Threonine synthase
ACP_3389
Operon
DOOR ID:
1181857
ACP_3389
(thrC2)
,
ACP_3390
View Structure
Genome:
Acidobacterium capsulatum ATCC 51196
(
NC_012483.1
);
Phylum:
Acidobacteriia
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