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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
179397-179511
(-)
FMN
178161-179262 (-)
ribD
Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
SPJ_0195
Operon
DOOR ID:
537636
SPJ_0192
(ribH)
,
SPJ_0193,
SPJ_0194
(ribE)
,
SPJ_0195
(ribD)
View Structure
2
381215-381303
(+)
glycine
381393-382716 (+)
SPJ_0395
D-alanine glycine permease
SPJ_0395
Single gene
DOOR ID:
2523571
SPJ_0395
View Structure
3
438002-438236
(+)
FMN
438400-438964 (+)
SPJ_0458
Riboflavin transporter
SPJ_0458
Operon
DOOR ID:
537691
SPJ_0458,
SPJ_0459,
SPJ_0460,
SPJ_0461
View Structure
4
636742-636830
(+)
TPP
637044-637713 (+)
SPJ_0656
Aminopyrimidine aminohydrolase
SPJ_0656
Single gene
DOOR ID:
2523659
SPJ_0656
View Structure
5
639572-639660
(+)
TPP
639921-640482 (+)
SPJ_0659
ABC-type cobalt transport system; permease component
SPJ_0659
Operon
DOOR ID:
537735
SPJ_0659,
SPJ_0660,
SPJ_0661
View Structure
6
646265-646363
(-)
TPP
645389-646181 (-)
thiD
Phosphomethylpyrimidine kinase
SPJ_0666
Single gene
DOOR ID:
2523660
SPJ_0666
(thiD)
View Structure
7
1674156-1674251
(+)
purine
1674650-1675232 (+)
xpt
Xanthine phosphoribosyltransferase (XPRTase) (2)
SPJ_1752
Operon
DOOR ID:
537973
SPJ_1752
(xpt)
,
SPJ_1753
View Structure
8
2080844-2080946
(-)
TPP
2080482-2080773 (-)
SPJ_2226
SPJ_2226
Operon
DOOR ID:
538055
SPJ_2223,
SPJ_2224,
SPJ_2225,
SPJ_2226
View Structure
Genome:
Streptococcus pneumoniae JJA
(
NC_012466.1
);
Phylum:
Firmicutes
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