RiboswitchDB

Genome: Brachyspira hyodysenteriae WA1 (NC_012225.1); Phylum: Spirochaetia

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

145268-145370 (+)

TPP

145467-146820 (+)

BHWA1_00129

Operon

DOOR ID: 535467

BHWA1_00129,
BHWA1_00130 (phzF),
BHWA1_00131 (thiM)

2

437568-437715 (-)

cobalamin

436933-437461 (-)

BHWA1_00395

Single gene

DOOR ID: 2519826

BHWA1_00395

3

2118790-2118929 (+)

cobalamin

2119079-2120051 (-)

BHWA1_01834

Single gene

DOOR ID: 2520475

BHWA1_01834

4

2323796-2323931 (+)

FMN

2324096-2325179 (+)

ribD

Single gene

DOOR ID: 2520589

BHWA1_02026 (ribD)

5

2828545-2828665 (-)

TPP

2826775-2828344 (-)

oppA

Single gene

DOOR ID: 2520775

BHWA1_02512 (oppA)

6

2953702-2953798 (-)

purine

2952308-2953679 (-)

BHWA1_02619

Single gene

DOOR ID: 2520826

BHWA1_02619

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