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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
312589-312689
(-)
TPP
310563-312498 (-)
thiC
EpC_02610
Operon
DOOR ID:
534783
EpC_02600
(thiE)
,
EpC_02610
(thiC)
View Structure
2
516853-517001
(+)
FMN
517108-517765 (+)
ribB
EpC_04320
Single gene
DOOR ID:
2518325
EpC_04320
(ribB)
View Structure
3
843004-843099
(-)
TPP
841978-842965 (-)
tbpA
EpC_07220
Operon
DOOR ID:
534869
EpC_07200
(thiQ)
,
EpC_07210
(thiP)
,
EpC_07220
(tbpA)
View Structure
4
1566996-1567097
(+)
TPP
1567131-1567923 (+)
thiM
EpC_13670
Operon
DOOR ID:
534999
EpC_13670
(thiM)
,
EpC_13680
(thiD)
View Structure
5
2651153-2651288
(-)
MOCO
2649644-2650160 (-)
moaB
EpC_23900
Operon
DOOR ID:
535178
EpC_23860,
EpC_23870
(moaE)
,
EpC_23880
(moaD)
,
EpC_23890
(moaC)
,
EpC_23900
(moaB)
,
EpC_23910
(moaA)
View Structure
6
2979724-2979793
(-)
fluoride
2979261-2979639 (-)
crcB
EpC_27100
Single gene
DOOR ID:
2519245
EpC_27100
(crcB)
View Structure
7
3647423-3647612
(+)
lysine
3647705-3649058 (+)
lysC
EpC_33330
Single gene
DOOR ID:
2519517
EpC_33330
(lysC)
View Structure
Genome:
Erwinia pyrifoliae Ep1/96
(
NC_012214.1
);
Phylum:
Gammaproteobacteria
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