Genome: Staphylococcus carnosus subsp. carnosus TM300 (NC_012121.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 7865-7976 (+)SAM8073-9234 (+)Sca_0010

Aminotransferase 		Sca_0010Single gene

DOOR ID: 2513781		Sca_0010 View Structure
2 46327-46428 (+)purine46818-47397 (+)xprT

Xanthine phosphoribosyltransferase (XPRTase) (2)		Sca_0047Operon

DOOR ID: 532467		Sca_0047 (xprT),
Sca_0048 (pbuX),
Sca_0049 (guaB),
Sca_0050 (guaA)		 View Structure
3 68533-68638 (+)SAM68711-68879 (+)Sca_0067

Sca_0067Single gene

DOOR ID: 2513813		Sca_0067 View Structure
4 349070-349176 (+)SAM349279-350098 (+)Sca_0342

Lipoprotein		Sca_0342Operon

DOOR ID: 532530		Sca_0342,
Sca_0343 (ldh)		 View Structure
5 365980-366026 (-)PreQ1365143-365815 (-)Sca_0360

7-cyano-7-deazaguanine synthase (0) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)		Sca_0360Operon

DOOR ID: 532533		Sca_0358,
Sca_0359,
Sca_0360		 View Structure
6 465274-465380 (+)SAM465477-466503 (+)Sca_0455

Methionine import ATP-binding protein MetN 		Sca_0455Operon

DOOR ID: 532553		Sca_0455,
Sca_0456,
Sca_0457		 View Structure
7 597773-597871 (+)TPP598053-599457 (+)thiC%27

Truncated thiamin biosynthesis protein ThiC (Fragment 1)		Sca_0594Operon

DOOR ID: 532581		Sca_0594 (thiC'),
Sca_0595 (thiC'')		 View Structure
8 629128-629246 (+)yybP-ykoY629355-630171 (+)Sca_0624

Putative TerC family integral membrane protein		Sca_0624Single gene

DOOR ID: 2514044		Sca_0624 View Structure
9 704860-704964 (-)TPP704180-704756 (-)Sca_0700

Putative membrane protein		Sca_0700Operon

DOOR ID: 532600		Sca_0698,
Sca_0699,
Sca_0700		 View Structure
10 1020328-1020425 (+)SAM1020487-1021768 (+)cysD

Putative O-acetylhomoserine (Thiol)-lyase (Homocysteine synthase) (9)		Sca_1003Operon

DOOR ID: 532662		Sca_1003 (cysD),
Sca_1004 (metA)		 View Structure
11 1055409-1055585 (+)lysine1055670-1056873 (+)lysC

Aspartokinase 		Sca_1037Operon

DOOR ID: 532668		Sca_1037 (lysC),
Sca_1038 (asd),
Sca_1039 (dapA),
Sca_1040 (dapB),
Sca_1041 (dapD)		 View Structure
12 1136272-1136404 (-)FMN1135663-1136212 (-)Sca_1116

Riboflavin transporter		Sca_1116Single gene

DOOR ID: 2514213		Sca_1116 View Structure
13 1177741-1177872 (-)glycine1176564-1177659 (-)gcvT

Aminomethyltransferase (0) (Glycine cleavage system T protein)		Sca_1161Operon

DOOR ID: 532698		Sca_1158 (gcvPB''),
Sca_1159 (gcvPB'),
Sca_1160 (gcvPA),
Sca_1161 (gcvT)		 View Structure
14 1295867-1296041 (-)lysine1294285-1295773 (-)lysP

Lysine-specific permease		Sca_1287Single gene

DOOR ID: 2514251		Sca_1287 (lysP) View Structure
15 1393959-1394090 (-)FMN1392734-1393784 (-)ribD

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		Sca_1375Operon

DOOR ID: 532745		Sca_1372 (ribH),
Sca_1373 (ribA),
Sca_1374 (ribB),
Sca_1375 (ribD)		 View Structure
16 1406633-1406748 (-)SAM1405327-1406524 (-)metK

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		Sca_1389Single gene

DOOR ID: 2514294		Sca_1389 (metK) View Structure
17 1617685-1617782 (-)TPP1616931-1617618 (-)tenA

Aminopyrimidine aminohydrolase (Thiaminase II)		Sca_1596Operon

DOOR ID: 532795		Sca_1593 (thiE),
Sca_1594 (thiM),
Sca_1595 (thiD),
Sca_1596 (tenA)		 View Structure
18 1674283-1674493 (-)glmS1672275-1674081 (-)glmS

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		Sca_1657Single gene

DOOR ID: 2514408		Sca_1657 (glmS) View Structure
19 1824290-1824387 (-)SAM1822219-1822741 (-)Sca_1821

Sca_1821Single gene

DOOR ID: 2514466		Sca_1821 View Structure
20 2088376-2088486 (+)TPP2088656-2089127 (+)Sca_2076

Sca_2076Operon

DOOR ID: 532879		Sca_2076,
Sca_2077 (goxB),
Sca_2078,
Sca_2079 (thiG),
Sca_2080		 View Structure
21 2224773-2224879 (-)SAM2223637-2224654 (-)Sca_2191

Methionine import ATP-binding protein MetN 		Sca_2191Operon

DOOR ID: 532896		Sca_2189,
Sca_2190,
Sca_2191		 View Structure
22 2344618-2344719 (+)TPP2344824-2345526 (+)fabG

3-oxoacyl-[acyl-carrier protein] reductase (00)		Sca_2279Single gene

DOOR ID: 2514710		Sca_2279 (fabG) View Structure