Genome: Desulfobacterium autotrophicum HRM2 (NC_012108.1); Phylum: delta/epsilon subdivisions
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 130897-131080 (+)cobalamin131583-133098 (+)HRM2_01030

ABC-type transporter; periplasmic substrate binding protein		HRM2_01030Operon

DOOR ID: 531092		HRM2_01030,
HRM2_01040,
HRM2_01050		 View Structure
2 131262-131445 (+)cobalamin131583-133098 (+)HRM2_01030

ABC-type transporter; periplasmic substrate binding protein		HRM2_01030Operon

DOOR ID: 531092		HRM2_01030,
HRM2_01040,
HRM2_01050		 View Structure
3 278765-278961 (-)cobalamin277551-278544 (-)HRM2_02340

Fe(III) ABC-type transporter; putative permease protein		HRM2_02340Operon

DOOR ID: 531113		HRM2_02230 (cobU),
HRM2_02240 (cobQ),
HRM2_02250 (cobO),
HRM2_02260 (cobJ),
HRM2_02270 (cbiG),
HRM2_02280 (cobM),
HRM2_02290 (cobL),
HRM2_02300,
HRM2_02310 (cbiL),
HRM2_02320,
HRM2_02330,
HRM2_02340		 View Structure
4 500398-500515 (-)TPP499596-500349 (-)HRM2_04320

ABC-type transporter; ATP-binding protein		HRM2_04320Operon

DOOR ID: 531157		HRM2_04290,
HRM2_04300,
HRM2_04310,
HRM2_04320		 View Structure
5 759127-759322 (-)cobalamin757720-759040 (-)thiC

5-hydroxybenzimidazole synthase (5-OHBza synthase) (HBI synthase) (3)		HRM2_06760Operon

DOOR ID: 531210		HRM2_06750 (cobT1),
HRM2_06760 (thiC)		 View Structure
6 870420-870609 (-)cobalamin868350-870264 (-)btuB1

BtuB1		HRM2_07670Operon

DOOR ID: 531228		HRM2_07660,
HRM2_07670 (btuB1)		 View Structure
7 870713-870914 (+)cobalamin871129-872086 (+)cbiK1

Sirohydrochlorin cobaltochelatase 		HRM2_07680Single gene

DOOR ID: 2512042		HRM2_07680 (cbiK1) View Structure
8 1380227-1380416 (+)cobalamin1380552-1380855 (+)HRM2_12170

HRM2_12170Single gene

DOOR ID: 2512209		HRM2_12170 View Structure
9 1801241-1801470 (-)cobalamin1799238-1801113 (-)HRM2_15670

Sodium/solute symporter family protein		HRM2_15670Operon

DOOR ID: 531384		HRM2_15640,
HRM2_15650,
HRM2_15660,
HRM2_15670		 View Structure
10 1839447-1839683 (+)cobalamin1839733-1840843 (+)trpD1

Anthranilate phosphoribosyltransferase (8)		HRM2_16000Operon

DOOR ID: 531389		HRM2_15990,
HRM2_16010,
HRM2_16020 (cobT2)		 View Structure
11 2425592-2425689 (+)preQ1-II2426735-2427206 (+)dctQ4

DctQ4		HRM2_21510Operon

DOOR ID: 531506		HRM2_21460,
HRM2_21470 (iorA2),
HRM2_21480 (iorB2),
HRM2_21490 (paaK1),
HRM2_21500 (dctP4),
HRM2_21510 (dctQ4),
HRM2_21520 (dctM4)		 View Structure
12 2561228-2561330 (+)TPP2561376-2562510 (+)tbpA

TbpA		HRM2_22600Operon

DOOR ID: 531535		HRM2_22600 (tbpA),
HRM2_22610 (thiP),
HRM2_22620		 View Structure
13 3010019-3010098 (-)c-di-GMP-I3007901-3009956 (-)HRM2_26400

Putative alkaline serine protease (Subtilase family protein)		HRM2_26400single gene

DOOR ID: 2512677		HRM2_26400 View Structure
14 3222711-3222858 (-)FMN3221807-3222461 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)		HRM2_28350Single gene

DOOR ID: 2512718		HRM2_28350 (ribB) View Structure
15 3231504-3231598 (-)glycine3229973-3231347 (-)alsT

AlsT		HRM2_28450Single gene

DOOR ID: 2512728		HRM2_28450 (alsT) View Structure
16 4281009-4281114 (-)TPP4279908-4280838 (-)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)		HRM2_38120Single gene

DOOR ID: 2512992		HRM2_38120 (thiM) View Structure