Genome: Macrococcus caseolyticus JCSC5402 (NC_011999.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 63783-63878 (-)SAM62441-63719 (-)MCCL_0060

O-acetylhomoserine (Thiol)-lyase homolog		MCCL_0060Operon

DOOR ID: 528450		MCCL_0059,
MCCL_0060		 View Structure
2 127848-127946 (-)TPP127192-127774 (-)thiE

Thiamine monophosphate synthase ThiE		MCCL_0120Operon

DOOR ID: 528464		MCCL_0119,
MCCL_0120 (thiE)		 View Structure
3 187992-188092 (+)SAM188149-189313 (+)MCCL_0180

MCCL_0180Single gene

DOOR ID: 2505636		MCCL_0180 View Structure
4 256120-256222 (+)SAM256308-257127 (+)MCCL_0254

Lipoprotein		MCCL_0254Operon

DOOR ID: 528486		MCCL_0254,
MCCL_0255		 View Structure
5 304831-304931 (+)TPP304993-306709 (+)MCCL_0298

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		MCCL_0298Single gene

DOOR ID: 2505674		MCCL_0298 View Structure
6 338170-338321 (+)glmS338376-340179 (+)MCCL_0324

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		MCCL_0324Single gene

DOOR ID: 2505690		MCCL_0324 View Structure
7 345096-345194 (+)SAM345246-346587 (+)MCCL_0329

MCCL_0329Operon

DOOR ID: 528502		MCCL_0329,
MCCL_0330 (mmuM),
MCCL_0331		 View Structure
8 444324-444429 (+)SAM444496-445519 (+)MCCL_0417

Methionine import ATP-binding protein MetN 		MCCL_0417Operon

DOOR ID: 528520		MCCL_0417,
MCCL_0418,
MCCL_0419		 View Structure
9 490851-490897 (-)PreQ1490142-490811 (-)MCCL_0465

7-cyano-7-deazaguanine synthase (0) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)		MCCL_0465Operon

DOOR ID: 528531		MCCL_0463,
MCCL_0464,
MCCL_0465		 View Structure
10 577447-577549 (+)SAM577620-578649 (+)MCCL_0539

Methionine import ATP-binding protein MetN 		MCCL_0539Operon

DOOR ID: 528548		MCCL_0539,
MCCL_0540,
MCCL_0541		 View Structure
11 851769-851864 (+)TPP852760-853771 (+)MCCL_0788

Regulatory protein		MCCL_0788Single gene

DOOR ID: 2505838		MCCL_0788 View Structure
12 969903-970001 (+)TPP970035-971037 (+)MCCL_0880

Pyrimidine biosynthesis enzyme		MCCL_0880Single gene

DOOR ID: 2505853		MCCL_0880 View Structure
13 1156525-1156698 (+)lysine1156769-1157993 (+)lysC

Aspartokinase 		MCCL_1048Operon

DOOR ID: 528660		MCCL_1048 (lysC),
MCCL_1049 (asd),
MCCL_1050 (dapA),
MCCL_1051 (dapB),
MCCL_1052 (dapD),
MCCL_1053,
MCCL_1054 (alr2),
MCCL_1055 (lysA)		 View Structure
14 1244563-1244680 (-)FMN1243982-1244522 (-)MCCL_1136

Riboflavin transporter		MCCL_1136Single gene

DOOR ID: 2505924		MCCL_1136 View Structure
15 1288485-1288570 (-)glycine1287333-1288452 (-)gcvT

Aminomethyltransferase (0) (Glycine cleavage system T protein)		MCCL_1181Operon

DOOR ID: 528693		MCCL_1179 (gcvP2),
MCCL_1180 (gcvP1),
MCCL_1181 (gcvT)		 View Structure
16 1458861-1459034 (-)lysine1456578-1457115 (-)infC

Translation initiation factor IF-3		MCCL_1345Operon

DOOR ID: 528730		MCCL_1343 (rplT),
MCCL_1344 (rpmI),
MCCL_1345 (infC)		 View Structure
17 1570535-1570622 (-)TPP1568565-1569660 (-)MCCL_1449

MCCL_1449Operon

DOOR ID: 528757		MCCL_1448,
MCCL_1449		 View Structure
18 1575251-1575377 (-)FMN1574088-1575114 (-)MCCL_1455

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		MCCL_1455Operon

DOOR ID: 528758		MCCL_1452 (ribH),
MCCL_1453,
MCCL_1454,
MCCL_1455		 View Structure
19 1589630-1589731 (+)SAM1590150-1591464 (-)MCCL_1469

MCCL_1469Operon

DOOR ID: 528762		MCCL_1469,
MCCL_1470		 View Structure
20 1623311-1623421 (-)SAM1622030-1623221 (-)metK

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		MCCL_1498Single gene

DOOR ID: 2506026		MCCL_1498 (metK) View Structure
21 1889588-1889683 (-)TPP1888857-1889526 (-)MCCL_1749

Aminopyrimidine aminohydrolase 		MCCL_1749Operon

DOOR ID: 528820		MCCL_1746 (thiE),
MCCL_1747 (thiM),
MCCL_1748 (thiD),
MCCL_1749		 View Structure
22 1924204-1924300 (-)SAM1922938-1924135 (-)hmrA

Peptidase M20 domain-containing protein 2		MCCL_1787Operon

DOOR ID: 528826		MCCL_1786,
MCCL_1787 (hmrA)		 View Structure
23 1945946-1946045 (+)SAM1946418-1947447 (-)MCCL_1811

MCCL_1811Single gene

DOOR ID: 2506159		MCCL_1811 View Structure
24 2087944-2088045 (-)purine2087291-2087876 (-)xprT

Xanthine phosphoribosyltransferase (XPRTase) (2)		MCCL_1944Operon

DOOR ID: 528864		MCCL_1941 (guaA),
MCCL_1942,
MCCL_1943,
MCCL_1944 (xprT)		 View Structure