Genome: Agrobacterium vitis S4 chromosome II (NC_011988.1); Phylum: Alphaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 18790-19006 (-)cobalamin16872-17832 (-)Avi_5019

ABC transporter substrate binding protein (Iron)

DOOR ID: 525887
View Structure
2 737746-737891 (-)FMN737141-737618 (-)Avi_5713

6;7-dimethyl-8-ribityllumazine synthase (DMRL synthase) (LS) (Lumazine synthase) (8)
Avi_5713Single gene

DOOR ID: 2500821
Avi_5713 View Structure
3 925823-925941 (+)TPP926046-927879 (+)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)

DOOR ID: 526041
Avi_5917 (thiC),
Avi_5918 (thiO),
Avi_5919 (thiS),
Avi_5920 (thiG),
View Structure
4 1043750-1043965 (-)cobalamin1043044-1043698 (-)Avi_6032

Membrane protein
Avi_6032Single gene

DOOR ID: 2500929
Avi_6032 View Structure