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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
169494-169608
(-)
FMN
168259-169360 (-)
ribD
SPN23F_01750
Operon
DOOR ID:
518765
SPN23F_01720
(ribH)
,
SPN23F_01730
(ribA)
,
SPN23F_01740
(ribE)
,
SPN23F_01750
(ribD)
View Structure
2
371186-371274
(+)
glycine
371364-372687 (+)
SPN23F_03840
SPN23F_03840
Single gene
DOOR ID:
2487712
SPN23F_03840
View Structure
3
428052-428286
(+)
FMN
428450-429014 (+)
SPN23F_04440
SPN23F_04440
Operon
DOOR ID:
518818
SPN23F_04440,
SPN23F_04450,
SPN23F_04460,
SPN23F_04470
View Structure
4
632439-632527
(+)
TPP
632741-633410 (+)
SPN23F_06400
SPN23F_06400
Single gene
DOOR ID:
2487789
SPN23F_06400
View Structure
5
635358-635446
(+)
TPP
635707-636268 (+)
SPN23F_06440
SPN23F_06440
Operon
DOOR ID:
518868
SPN23F_06440,
SPN23F_06450,
SPN23F_06460
View Structure
6
642051-642149
(-)
TPP
641175-641967 (-)
thiD
SPN23F_06510
Single gene
DOOR ID:
2487790
SPN23F_06510
(thiD)
View Structure
7
1807847-1807942
(+)
purine
1808341-1808923 (+)
xpt
SPN23F_18620
Operon
DOOR ID:
519105
SPN23F_18620
(xpt)
,
SPN23F_18630
(pbuX)
View Structure
8
2181665-2181767
(-)
TPP
2181303-2181594 (-)
SPN23F_22330
SPN23F_22330
Operon
DOOR ID:
519170
SPN23F_22300,
SPN23F_22310,
SPN23F_22320,
SPN23F_22330
View Structure
Genome:
Streptococcus pneumoniae ATCC 700669
(
NC_011900.1
);
Phylum:
Firmicutes
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