Genome: Cyanothece sp. PCC 7425 (NC_011884.1); Phylum: Cyanobacteria/Melainabacteria group
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 106982-107070 (-)c-di-GMP-I106488-106731 (-)Cyan7425_0305

Transcriptional regulator; XRE family		Cyan7425_0305single gene

DOOR ID: 2475298		Cyan7425_0305 View Structure
2 1032792-1032962 (+)cobalamin1032993-1034091 (+)Cyan7425_1197

Cobalamin (Vitamin B12) biosynthesis CbiX protein		Cyan7425_1197Single gene

DOOR ID: 2475726		Cyan7425_1197 View Structure
3 1229443-1229538 (-)glutamine1228966-1229407 (-)Cyan7425_1393

Cyan7425_1393Single gene

DOOR ID: 2475808		Cyan7425_1393 View Structure
4 1250567-1250822 (-)yybP-ykoY1249744-1250362 (-)Cyan7425_1416

Cyan7425_1416Operon

DOOR ID: 513318		Cyan7425_1415,
Cyan7425_1416		 View Structure
5 2022506-2022600 (+)c-di-GMP-I2022705-2023083 (+)Cyan7425_2124

Uncharacterized protein		Cyan7425_2124single gene

DOOR ID: 2476184		Cyan7425_2124 View Structure
6 2236925-2237049 (-)ykkC-yxkD2236102-2236834 (-)Cyan7425_2306

Urea carboxylase-associated protein 2		Cyan7425_2306Operon

DOOR ID: 513489		Cyan7425_2304,
Cyan7425_2305,
Cyan7425_2306		 View Structure
7 2330090-2330186 (+)glutamine2330244-2330655 (+)Cyan7425_2387

Cyan7425_2387Single gene

DOOR ID: 2476307		Cyan7425_2387 View Structure
8 3187747-3187843 (+)TPP3187850-3189227 (+)Cyan7425_3220

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		Cyan7425_3220Single gene

DOOR ID: 2476699		Cyan7425_3220 View Structure
9 3220585-3220715 (-)ykkC-yxkD3218541-3219426 (-)Cyan7425_3255

Binding-protein-dependent transport systems inner membrane component		Cyan7425_3255Operon

DOOR ID: 513662		Cyan7425_3252,
Cyan7425_3253,
Cyan7425_3254,
Cyan7425_3255,
Cyan7425_3256		 View Structure
10 3682885-3682978 (+)c-di-GMP-I3683016-3684744 (-)mutL

DNA mismatch repair protein MutL		Cyan7425_3702operon

DOOR ID: 513752		Cyan7425_3702 (mutL),
Cyan7425_3703		 View Structure
11 4373127-4373290 (-)ydaO-yuaA4372442-4373027 (-)Cyan7425_4306

Cyan7425_4306Operon

DOOR ID: 513869		Cyan7425_4305,
Cyan7425_4306		 View Structure
12 4727068-4727152 (-)glutamine4726624-4727023 (-)Cyan7425_4644

Cyan7425_4644Single gene

DOOR ID: 2477371		Cyan7425_4644 View Structure
13 5088371-5088464 (+)c-di-GMP-I5088962-5089316 (+)Cyan7425_5002

Antibiotic biosynthesis monooxygenase domain-containing protein		Cyan7425_5002single gene

DOOR ID: 2477532		Cyan7425_5002 View Structure
14 5144072-5144225 (+)cobalamin5144255-5144891 (+)Cyan7425_5052

HupE/UreJ protein		Cyan7425_5052Single gene

DOOR ID: 2477567		Cyan7425_5052 View Structure
15 5144113-5144262 (+)AdoCbl5144910-5145123 (-)Cyan7425_5053

Cyan7425_5053Single gene

DOOR ID: 2477568		Cyan7425_5053 View Structure
16 5369055-5369217 (+)ydaO-yuaA5369301-5370645 (+)Cyan7425_5261

Citrate transporter		Cyan7425_5261Single gene

DOOR ID: 2477676		Cyan7425_5261 View Structure