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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
1036653-1036753
(+)
TPP
1037705-1039256 (+)
thiD
Thiamine-phosphate synthase (TP synthase) (TPS) (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase) (TMP-PPase)
BLA_0815
Operon
DOOR ID:
511255
BLA_0814
(thiM)
,
BLA_0815
(thiD)
View Structure
2
1318052-1318189
(-)
TPP
1316097-1317063 (-)
BLA_1028
Extracellular solute-binding protein; family 3
BLA_1028
Operon
DOOR ID:
511299
BLA_1027,
BLA_1028
View Structure
3
1534042-1534141
(+)
TPP
1534994-1535300 (-)
BLA_1214
BLA_1214
Single gene
DOOR ID:
2471468
BLA_1214
View Structure
4
1539662-1539805
(-)
FMN
1539061-1539658 (-)
BLA_1217
Riboflavin transporter
BLA_1217
Operon
DOOR ID:
511335
BLA_1216
(cbiO)
,
BLA_1217
View Structure
5
1553276-1553383
(-)
TPP
1552641-1553250 (-)
ykoE
ABC transporter; permease protein
BLA_1225
Single gene
DOOR ID:
2471475
BLA_1225
(ykoE)
View Structure
6
1565214-1565323
(+)
TPP
1565360-1565981 (+)
BLA_1236
ABC transporter; permease protein
BLA_1236
Operon
DOOR ID:
511338
BLA_1236,
BLA_1237
View Structure
Genome:
Bifidobacterium animalis subsp. lactis AD011
(
NC_011835.1
);
Phylum:
Actinobacteria
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