Genome: Bacillus cereus AH820 (NC_011773.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 157536-157691 (+)glmS157882-159685 (+)glmS

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		BCAH820_0181Single gene

DOOR ID: 2463066		BCAH820_0181 (glmS) View Structure
2 177170-177284 (-)SAM176271-177084 (-)BCAH820_0196

Lipoprotein		BCAH820_0196Operon

DOOR ID: 507427		BCAH820_0194,
BCAH820_0195,
BCAH820_0196		 View Structure
3 185596-185701 (+)SAM185831-186755 (+)BCAH820_0205

Oligopeptide ABC transporter; permease protein		BCAH820_0205Operon

DOOR ID: 507429		BCAH820_0205,
BCAH820_0206,
BCAH820_0207,
BCAH820_0208,
BCAH820_0209		 View Structure
4 197093-197199 (-)SAM195319-196960 (-)BCAH820_0215

Putative oligopeptide ABC transporter; oligopeptide-binding protein		BCAH820_0215Single gene

DOOR ID: 2463084		BCAH820_0215 View Structure
5 261248-261349 (+)purine261514-263053 (+)guaA

GMP synthase [glutamine-hydrolyzing] (GMP synthetase) (Glutamine amidotransferase)		BCAH820_0294Single gene

DOOR ID: 2463116		BCAH820_0294 (guaA) View Structure
6 263208-263309 (+)purine263436-264762 (+)BCAH820_0295

Xanthine/uracil permease family protein		BCAH820_0295Single gene

DOOR ID: 2463117		BCAH820_0295 View Structure
7 303099-303200 (+)purine303310-303796 (+)purE

N5-carboxyaminoimidazole ribonucleotide mutase (N5-CAIR mutase) (8) (5-(carboxyamino)imidazole ribonucleotide mutase)		BCAH820_0320Operon

DOOR ID: 507446		BCAH820_0320 (purE),
BCAH820_0321 (purK),
BCAH820_0322 (purB),
BCAH820_0323 (purC),
BCAH820_0324,
BCAH820_0325 (purQ),
BCAH820_0326 (purL),
BCAH820_0327 (purF),
BCAH820_0328 (purM),
BCAH820_0329 (purN),
BCAH820_0330 (purH),
BCAH820_0331 (purD)		 View Structure
8 328375-328480 (+)SAM328603-329623 (+)BCAH820_0343

Methionine import ATP-binding protein MetN 		BCAH820_0343Operon

DOOR ID: 507449		BCAH820_0343,
BCAH820_0344,
BCAH820_0345		 View Structure
9 351348-351449 (-)purine349948-351145 (-)BCAH820_0364

Nucleoside transporter; NupC family		BCAH820_0364Single gene

DOOR ID: 2463139		BCAH820_0364 View Structure
10 381459-381571 (-)SAM380739-381372 (-)BCAH820_0395

Putative cyclase		BCAH820_0395Single gene

DOOR ID: 2463154		BCAH820_0395 View Structure
11 410212-410321 (+)TPP410393-411200 (+)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)		BCAH820_0419Operon

DOOR ID: 507462		BCAH820_0419 (thiM),
BCAH820_0420 (thiE)		 View Structure
12 413589-413673 (+)c-di-GMP-I413814-415554 (+)BCAH820_0422

Methyl-accepting chemotaxis protein		BCAH820_0422single gene

DOOR ID: 2463172		BCAH820_0422 View Structure
13 415616-415718 (+)TPP415817-416138 (+)BCAH820_0423

BCAH820_0423Operon

DOOR ID: 507463		BCAH820_0423,
BCAH820_0424,
BCAH820_0425,
BCAH820_0426		 View Structure
14 766188-766300 (+)TPP766548-767244 (+)BCAH820_0802

Aminopyrimidine aminohydrolase 		BCAH820_0802Operon

DOOR ID: 507528		BCAH820_0802,
BCAH820_0803,
BCAH820_0804,
BCAH820_0805,
BCAH820_0806 (tenI),
BCAH820_0807 (thiO),
BCAH820_0808 (thiS),
BCAH820_0809 (thiG),
BCAH820_0810,
BCAH820_0811 (thiD1)		 View Structure
15 766361-766464 (+)TPP766548-767244 (+)BCAH820_0802

Aminopyrimidine aminohydrolase 		BCAH820_0802Operon

DOOR ID: 507528		BCAH820_0802,
BCAH820_0803,
BCAH820_0804,
BCAH820_0805,
BCAH820_0806 (tenI),
BCAH820_0807 (thiO),
BCAH820_0808 (thiS),
BCAH820_0809 (thiG),
BCAH820_0810,
BCAH820_0811 (thiD1)		 View Structure
16 774362-774509 (+)ydaO-yuaA774602-774989 (+)BCAH820_0812

BCAH820_0812Operon

DOOR ID: 507529		BCAH820_0812,
BCAH820_0813,
BCAH820_0814		 View Structure
17 775496-775641 (+)ydaO-yuaA775941-777609 (+)kdpA

Potassium-transporting ATPase potassium-binding subunit (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) (Potassium-translocating ATPase A chain)		BCAH820_0815Operon

DOOR ID: 507530		BCAH820_0815 (kdpA),
BCAH820_0816 (kdpB),
BCAH820_0817 (kdpC),
BCAH820_0818 (kdpD)		 View Structure
18 896459-896641 (-)lysine894887-896312 (-)BCAH820_0941

Amino acid permease family protein		BCAH820_0941Operon

DOOR ID: 507557		BCAH820_0940,
BCAH820_0941		 View Structure
19 1334688-1334852 (-)yybP-ykoY1333801-1334596 (-)BCAH820_1398

Membrane protein; TerC family		BCAH820_1398Single gene

DOOR ID: 2463611		BCAH820_1398 View Structure
20 1364472-1364515 (+)PreQ11364608-1365271 (+)BCAH820_1430

7-cyano-7-deazaguanine synthase (0) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)		BCAH820_1430Operon

DOOR ID: 507646		BCAH820_1430,
BCAH820_1431,
BCAH820_1432,
BCAH820_1433		 View Structure
21 1426566-1426747 (+)lysine1426927-1428244 (+)lysA

Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (0)		BCAH820_1510Single gene

DOOR ID: 2463668		BCAH820_1510 (lysA) View Structure
22 1428361-1428469 (+)SAM1428541-1428685 (+)BCAH820_1511

BCAH820_1511Single gene

DOOR ID: 2463669		BCAH820_1511 View Structure
23 1442416-1442521 (+)SAM1442616-1443933 (+)BCAH820_1526

Na+/H+ antiporter family protein		BCAH820_1526Single gene

DOOR ID: 2463674		BCAH820_1526 View Structure
24 1490490-1490629 (+)FMN1490791-1490911 (+)BCAH820_1575

BCAH820_1575Single gene

DOOR ID: 2463705		BCAH820_1575 View Structure
25 1565198-1565299 (+)purine1565405-1565999 (+)xpt

Xanthine phosphoribosyltransferase (XPRTase) (2)		BCAH820_1661Operon

DOOR ID: 507686		BCAH820_1661 (xpt),
BCAH820_1662 (pbuX)		 View Structure
26 1578028-1578191 (+)ykoK1578536-1579262 (+)BCAH820_1674

Putative cation transporter		BCAH820_1674Single gene

DOOR ID: 2463744		BCAH820_1674 View Structure
27 1610022-1610066 (+)PreQ11610072-1610558 (+)BCAH820_1693

BCAH820_1693Single gene

DOOR ID: 2463752		BCAH820_1693 View Structure
28 1755269-1755455 (-)lysine1753839-1755069 (-)dapG1

Aspartokinase 		BCAH820_1857Single gene

DOOR ID: 2463817		BCAH820_1857 (dapG1) View Structure
29 1824306-1824452 (+)ydaO-yuaA1824596-1826423 (+)BCAH820_1921

Putative membrane protein		BCAH820_1921Single gene

DOOR ID: 2463855		BCAH820_1921 View Structure
30 1850666-1850775 (+)SAM1850904-1852125 (+)BCAH820_1942

Multidrug resistance protein putative tetracycline resistance determinant		BCAH820_1942Single gene

DOOR ID: 2463868		BCAH820_1942 View Structure
31 2285448-2285567 (-)glycine2283972-2285340 (-)BCAH820_2399

Sodium/alanine symporter family protein		BCAH820_2399Single gene

DOOR ID: 2464101		BCAH820_2399 View Structure
32 2499253-2499358 (+)TPP2499481-2500171 (+)tenA

Aminopyrimidine aminohydrolase 		BCAH820_2628Single gene

DOOR ID: 2464243		BCAH820_2628 (tenA) View Structure
33 2525026-2525141 (+)SAM2525280-2525829 (+)BCAH820_2657

BCAH820_2657Operon

DOOR ID: 507850		BCAH820_2657,
BCAH820_2658,
BCAH820_2659		 View Structure
34 2919877-2920069 (+)lysine2920181-2921648 (+)lysP

Lysine-specific permease		BCAH820_3085Single gene

DOOR ID: 2464473		BCAH820_3085 (lysP) View Structure
35 3053996-3054097 (-)SAM3052701-3053907 (-)BCAH820_3215

Peptidase M20 domain-containing protein 2		BCAH820_3215Single gene

DOOR ID: 2464549		BCAH820_3215 View Structure
36 3179798-3179896 (-)SAM3179437-3179695 (-)BCAH820_3333

BCAH820_3333Single gene

DOOR ID: 2464615		BCAH820_3333 View Structure
37 3223694-3223835 (+)ydaO-yuaA3223932-3224076 (+)BCAH820_3383

BCAH820_3383Single gene

DOOR ID: 2464644		BCAH820_3383 View Structure
38 3640121-3640222 (-)purine3639161-3639887 (-)BCAH820_3805

Transcriptional regulator; GntR family		BCAH820_3805Single gene

DOOR ID: 2464867		BCAH820_3805 View Structure
39 3850422-3850610 (+)cobalamin3850737-3853026 (+)metE

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)		BCAH820_4021Single gene

DOOR ID: 2464943		BCAH820_4021 (metE) View Structure
40 3881822-3881963 (-)SAM3880549-3881731 (-)mtnK

Methylthioribose kinase (MTR kinase) (00)		BCAH820_4054Operon

DOOR ID: 508110		BCAH820_4053 (mtnA),
BCAH820_4054 (mtnK)		 View Structure
41 3884157-3884264 (+)SAM3884328-3885573 (+)mtnW

2;3-diketo-5-methylthiopentyl-1-phosphate enolase (DK-MTP-1-P enolase) (RuBisCO-like protein) (RLP)		BCAH820_4057Operon

DOOR ID: 508111		BCAH820_4057 (mtnW),
BCAH820_4058 (mtnX),
BCAH820_4059 (mtnB),
BCAH820_4060		 View Structure
42 3946104-3946247 (+)FMN3946558-3947671 (+)ribD

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		BCAH820_4133Operon

DOOR ID: 508123		BCAH820_4133 (ribD),
BCAH820_4134 (ribE),
BCAH820_4135 (ribBA),
BCAH820_4136 (ribH)		 View Structure
43 3955647-3955709 (-)glutamine3954178-3954907 (-)bioD

ATP-dependent dethiobiotin synthetase BioD (DTB synthetase) (DTBS) (Dethiobiotin synthase)		BCAH820_4142Operon

DOOR ID: 508124		BCAH820_4138 (bioB),
BCAH820_4139,
BCAH820_4140,
BCAH820_4141 (bioF),
BCAH820_4142 (bioD),
BCAH820_4143 (bioA)		 View Structure
44 4065897-4066006 (-)SAM4063993-4065826 (-)BCAH820_4275

Homocysteine S-methyltransferase domain protein/methylenetetrahydrofolate reductase family protein		BCAH820_4275Operon

DOOR ID: 508148		BCAH820_4273 (murG2),
BCAH820_4274 (metH),
BCAH820_4275		 View Structure
45 4066209-4066318 (+)SAM4066412-4067525 (+)metI

Cystathionine gamma-synthase/O-acetylhomoserine thiolyase		BCAH820_4276Operon

DOOR ID: 508149		BCAH820_4276 (metI),
BCAH820_4277		 View Structure
46 4618288-4618409 (-)SAM4616918-4618118 (-)metK

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		BCAH820_4886Single gene

DOOR ID: 2465299		BCAH820_4886 (metK) View Structure
47 4654156-4654257 (+)TPP4654343-4655012 (+)BCAH820_4930

Probable proton-coupled thiamine transporter YuaJ		BCAH820_4930Single gene

DOOR ID: 2465326		BCAH820_4930 View Structure
48 4800351-4800458 (-)SAM4799026-4800052 (-)BCAH820_5092

Methionine import ATP-binding protein MetN 		BCAH820_5092Operon

DOOR ID: 508315		BCAH820_5089,
BCAH820_5090,
BCAH820_5091,
BCAH820_5092		 View Structure
49 4890016-4890075 (+)fluoride4890099-4890534 (+)BCAH820_5186

Putative fluoride ion transporter CrcB		BCAH820_5186Operon

DOOR ID: 508338		BCAH820_5186,
BCAH820_5187		 View Structure
50 5012765-5012880 (-)TPP5010891-5012652 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		BCAH820_5316Single gene

DOOR ID: 2465491		BCAH820_5316 (thiC) View Structure
51 5204076-5204181 (-)SAM5202684-5203983 (-)BCAH820_5501

O-acetylhomoserine/O-acetylserine sulfhydrylase		BCAH820_5501Operon

DOOR ID: 508401		BCAH820_5500 (metA),
BCAH820_5501		 View Structure