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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
466131-466262
(+)
SAH
466290-467688 (+)
ahcY
Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
AFE_0534
Operon
DOOR ID:
502671
AFE_0533,
AFE_0534
(ahcY)
,
AFE_0535
(metF)
View Structure
2
864231-864324
(+)
TPP
864397-866281 (+)
thiC
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
AFE_0948
Single gene
DOOR ID:
2452878
AFE_0948
(thiC)
View Structure
3
1752160-1752308
(-)
FMN
1751388-1752060 (-)
ribB
3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
AFE_1994
Single gene
DOOR ID:
2453701
AFE_1994
(ribB)
View Structure
4
2606884-2606947
(+)
fluoride
2606998-2607376 (+)
AFE_2926
Putative fluoride ion transporter CrcB
AFE_2926
Operon
DOOR ID:
503150
AFE_2926,
AFE_2927
View Structure
Genome:
Acidithiobacillus ferrooxidans ATCC 23270
(
NC_011761.1
);
Phylum:
Acidithiobacillia
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