Genome: Escherichia fergusonii ATCC 35469 (NC_011740.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 89841-89940 (-)TPP88826-89810 (-)tbpA

Thiamin transporter subunit periplasmic-binding component of ABC superfamily		EFER_0082Operon

DOOR ID: 494166		EFER_0080 (thiQ),
EFER_0081 (thiP),
EFER_0082 (tbpA)		 View Structure
2 1292846-1293071 (-)yybP-ykoY1292272-1292839 (-)yebN

Probable manganese efflux pump MntP		EFER_1254Operon

DOOR ID: 494400		EFER_1254 (yebN),
EFER_1255		 View Structure
3 2058738-2058913 (-)cobalamin2058049-2058535 (-)EFER_2003

EFER_2003Single gene

DOOR ID: 2437206		EFER_2003 View Structure
4 2236440-2236536 (-)TPP2235618-2236407 (-)EFER_2190

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)		EFER_2190Operon

DOOR ID: 494561		EFER_2188 (yegX),
EFER_2189 (thiD),
EFER_2190		 View Structure
5 2387698-2387842 (-)MOCO2386186-2386699 (-)moaB

Molybdenum cofactor biosynthesis protein B		EFER_2329Operon

DOOR ID: 494587		EFER_2325 (ybhL),
EFER_2326 (moaE),
EFER_2327 (moaD),
EFER_2328 (moaC),
EFER_2329 (moaB),
EFER_2330 (moaA)		 View Structure
6 3059826-3059974 (-)FMN3059066-3059720 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)		EFER_2990Single gene

DOOR ID: 2437523		EFER_2990 (ribB) View Structure
7 3852916-3853016 (+)TPP3853096-3854992 (+)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		EFER_3760Operon

DOOR ID: 494861		EFER_3760 (thiC),
EFER_3761 (thiE),
EFER_3762 (thiF),
EFER_3763 (thiS),
EFER_3764 (thiG),
EFER_3765 (thiH)		 View Structure
8 3884457-3884647 (-)cobalamin3882547-3884392 (-)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)		EFER_3793Operon

DOOR ID: 494866		EFER_3792 (murI),
EFER_3793 (btuB)		 View Structure
9 4309552-4309598 (+)mini-ykkC4309929-4310463 (-)blc

EFER_4203Operon

DOOR ID: 494945		EFER_4203 (blc),
EFER_4204 (ampC),
EFER_4205 (frdD),
EFER_4206 (frdC),
EFER_4207 (frdB),
EFER_4208 (frdA)		 View Structure