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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
2167159-2167316
(+)
cobalamin
2167348-2168014 (+)
PCC8801_2095
HupE/UreJ protein
PCC8801_2095
Single gene
DOOR ID:
2431739
PCC8801_2095
View Structure
2
2746398-2746495
(+)
TPP
2746504-2747887 (+)
PCC8801_2662
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
PCC8801_2662
Single gene
DOOR ID:
2432035
PCC8801_2662
View Structure
3
2901189-2901345
(+)
ydaO-yuaA
2901874-2903209 (+)
PCC8801_2811
Citrate transporter
PCC8801_2811
Single gene
DOOR ID:
2432106
PCC8801_2811
View Structure
4
3841746-3841875
(+)
ydaO-yuaA
3841971-3842814 (+)
PCC8801_3675
Nitrate ABC transporter; inner membrane subunit
PCC8801_3675
Operon
DOOR ID:
492873
PCC8801_3675,
PCC8801_3676,
PCC8801_3677
View Structure
5
4560430-4560495
(-)
glutamine
4560237-4560393 (-)
PCC8801_4348
PCC8801_4348
Operon
DOOR ID:
492982
PCC8801_4347,
PCC8801_4348
View Structure
Genome:
Cyanothece sp. PCC 8801
(
NC_011726.1
);
Phylum:
Cyanobacteria/Melainabacteria group
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