Genome: Shewanella baltica OS223 (NC_011663.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 160704-160933 (-)FMN159857-160511 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
Sbal223_0138Single gene

DOOR ID: 2423834
Sbal223_0138 (ribB) View Structure
2 321575-321708 (+)MOCO322772-323249 (+)moaC

Cyclic pyranopterin monophosphate synthase (7) (Molybdenum cofactor biosynthesis protein C)

DOOR ID: 489785
Sbal223_0281 (moaA),
Sbal223_0282 (moaC)
View Structure
3 1002912-1003062 (+)glycine1003311-1004670 (+)Sbal223_0857

Amino acid carrier protein
Sbal223_0857Single gene

DOOR ID: 2424173
Sbal223_0857 View Structure
4 1178533-1178698 (+)cobalamin1178797-1179691 (+)Sbal223_0997

ABC transporter related
Sbal223_0997Single gene

DOOR ID: 2424255
Sbal223_0997 View Structure
5 1519289-1519377 (+)c-di-GMP-I1519492-1522099 (+)Sbal223_1284

Glycoside hydrolase family 18
Sbal223_1284single gene

DOOR ID: 2424394
Sbal223_1284 View Structure
6 1762777-1762973 (+)lysine1763052-1764621 (+)Sbal223_1513

Na+/H+ antiporter NhaC
Sbal223_1513Single gene

DOOR ID: 2424475
Sbal223_1513 View Structure
7 1791552-1791600 (+)mini-ykkC1791615-1791930 (+)Sbal223_1533

Sbal223_1533Single gene

DOOR ID: 2424487
Sbal223_1533 View Structure
8 2390249-2390347 (+)TPP2390547-2392671 (+)Sbal223_2024

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)

DOOR ID: 490070
Sbal223_2028 (thiG),
Sbal223_2029 (thiH)
View Structure
9 2960746-2960871 (-)TPP2958456-2960691 (-)Sbal223_2484

TonB-dependent receptor
Sbal223_2484Single gene

DOOR ID: 2424989
Sbal223_2484 View Structure
10 4025149-4025248 (-)c-di-GMP-I4023580-4025026 (-)Sbal223_3390

GlcNAc-binding protein A
Sbal223_3390single gene

DOOR ID: 2425447
Sbal223_3390 View Structure
11 4025473-4025576 (+)yybP-ykoY4025659-4026214 (+)Sbal223_3391

Sbal223_3391Single gene

DOOR ID: 2425448
Sbal223_3391 View Structure
12 4246447-4246681 (-)cobalamin4244376-4246338 (-)Sbal223_3576

TonB-dependent receptor
Sbal223_3576Single gene

DOOR ID: 2425563
Sbal223_3576 View Structure
13 4339285-4339459 (-)lysine4337778-4339134 (-)Sbal223_3658


DOOR ID: 490340
View Structure