Genome: Bacillus cereus AH187 (NC_011658.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 163292-163447 (+)glmS163638-165441 (+)glmS

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		BCAH187_A0203Single gene

DOOR ID: 2418750		BCAH187_A0203 (glmS) View Structure
2 182923-183037 (-)SAM182023-182836 (-)BCAH187_A0219

Lipoprotein		BCAH187_A0219Operon

DOOR ID: 487005		BCAH187_A0217,
BCAH187_A0218,
BCAH187_A0219		 View Structure
3 191358-191463 (+)SAM191598-192516 (+)BCAH187_A0229

Oligopeptide ABC transporter; permease protein		BCAH187_A0229Operon

DOOR ID: 487007		BCAH187_A0229,
BCAH187_A0230,
BCAH187_A0231,
BCAH187_A0232,
BCAH187_A0233		 View Structure
4 201735-201841 (-)SAM199961-201602 (-)BCAH187_A0237

Putative oligopeptide ABC transporter; oligopeptide-binding protein		BCAH187_A0237Single gene

DOOR ID: 2418768		BCAH187_A0237 View Structure
5 269246-269347 (+)purine269502-271050 (+)guaA

GMP synthase [glutamine-hydrolyzing] (GMP synthetase) (Glutamine amidotransferase)		BCAH187_A0319Single gene

DOOR ID: 2418806		BCAH187_A0319 (guaA) View Structure
6 271205-271306 (+)purine271434-272760 (+)BCAH187_A0321

Xanthine/uracil permease family protein		BCAH187_A0321Single gene

DOOR ID: 2418807		BCAH187_A0321 View Structure
7 318610-318711 (+)purine318821-319307 (+)purE

N5-carboxyaminoimidazole ribonucleotide mutase (N5-CAIR mutase) (8) (5-(carboxyamino)imidazole ribonucleotide mutase)		BCAH187_A0361Operon

DOOR ID: 487021		BCAH187_A0361 (purE),
BCAH187_A0362 (purK),
BCAH187_A0363 (purB),
BCAH187_A0364 (purC),
BCAH187_A0365,
BCAH187_A0366 (purQ),
BCAH187_A0367 (purL),
BCAH187_A0368 (purF),
BCAH187_A0369 (purM),
BCAH187_A0370 (purN),
BCAH187_A0371 (purH)		 View Structure
8 344140-344246 (+)SAM344369-345389 (+)BCAH187_A0385

Methionine import ATP-binding protein MetN 		BCAH187_A0385Operon

DOOR ID: 487024		BCAH187_A0385,
BCAH187_A0386,
BCAH187_A0387		 View Structure
9 365751-365852 (-)purine364352-365549 (-)BCAH187_A0405

Nucleoside transporter; NupC family		BCAH187_A0405Single gene

DOOR ID: 2418831		BCAH187_A0405 View Structure
10 422414-422526 (-)SAM421694-422327 (-)BCAH187_A0456

Putative cyclase		BCAH187_A0456Single gene

DOOR ID: 2418854		BCAH187_A0456 View Structure
11 459730-459839 (+)TPP459911-460718 (+)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)		BCAH187_A0486Operon

DOOR ID: 487042		BCAH187_A0486 (thiM),
BCAH187_A0487 (thiE)		 View Structure
12 464065-464149 (+)c-di-GMP-I464290-466030 (+)BCAH187_A0490

Methyl-accepting chemotaxis protein		BCAH187_A0490single gene

DOOR ID: 2418872		BCAH187_A0490 View Structure
13 466092-466193 (+)TPP466293-466614 (+)BCAH187_A0492

BCAH187_A0492Operon

DOOR ID: 487043		BCAH187_A0492,
BCAH187_A0493,
BCAH187_A0494,
BCAH187_A0495		 View Structure
14 820807-820919 (+)TPP821164-821860 (+)BCAH187_A0879

Aminopyrimidine aminohydrolase 		BCAH187_A0879Operon

DOOR ID: 487107		BCAH187_A0879,
BCAH187_A0880,
BCAH187_A0881,
BCAH187_A0882,
BCAH187_A0883 (tenI),
BCAH187_A0884 (thiO),
BCAH187_A0885 (thiS),
BCAH187_A0886 (thiG),
BCAH187_A0887,
BCAH187_A0888 (thiD1)		 View Structure
15 820980-821082 (+)TPP821164-821860 (+)BCAH187_A0879

Aminopyrimidine aminohydrolase 		BCAH187_A0879Operon

DOOR ID: 487107		BCAH187_A0879,
BCAH187_A0880,
BCAH187_A0881,
BCAH187_A0882,
BCAH187_A0883 (tenI),
BCAH187_A0884 (thiO),
BCAH187_A0885 (thiS),
BCAH187_A0886 (thiG),
BCAH187_A0887,
BCAH187_A0888 (thiD1)		 View Structure
16 828979-829126 (+)ydaO-yuaA829219-829606 (+)BCAH187_A0890

BCAH187_A0890Operon

DOOR ID: 487108		BCAH187_A0890,
BCAH187_A0891		 View Structure
17 830115-830260 (+)ydaO-yuaA830559-832227 (+)kdpA

Potassium-transporting ATPase potassium-binding subunit (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) (Potassium-translocating ATPase A chain)		BCAH187_A0894Operon

DOOR ID: 487109		BCAH187_A0894 (kdpA),
BCAH187_A0895 (kdpB),
BCAH187_A0896 (kdpC),
BCAH187_A0897 (kdpD)		 View Structure
18 846810-846915 (-)SAM845608-846721 (-)BCAH187_A0909

Methylthioribose-binding protein		BCAH187_A0909Operon

DOOR ID: 487111		BCAH187_A0907,
BCAH187_A0908,
BCAH187_A0909		 View Structure
19 956612-956794 (-)lysine955039-956464 (-)BCAH187_A1029

Amino acid permease family protein		BCAH187_A1029Operon

DOOR ID: 487135		BCAH187_A1028,
BCAH187_A1029		 View Structure
20 1374232-1374396 (-)yybP-ykoY1373345-1374140 (-)BCAH187_A1462

Membrane protein; TerC family		BCAH187_A1462Single gene

DOOR ID: 2419336		BCAH187_A1462 View Structure
21 1404017-1404060 (+)PreQ11404153-1404816 (+)BCAH187_A1497

7-cyano-7-deazaguanine synthase (0) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)		BCAH187_A1497Operon

DOOR ID: 487211		BCAH187_A1497,
BCAH187_A1498,
BCAH187_A1499,
BCAH187_A1500		 View Structure
22 1465861-1466042 (+)lysine1466222-1467539 (+)lysA

Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (0)		BCAH187_A1579Single gene

DOOR ID: 2419396		BCAH187_A1579 (lysA) View Structure
23 1467657-1467765 (+)SAM1467837-1467981 (+)BCAH187_A1581

BCAH187_A1581Single gene

DOOR ID: 2419397		BCAH187_A1581 View Structure
24 1480425-1480530 (+)SAM1480624-1481941 (+)BCAH187_A1596

Na+/H+ antiporter family protein		BCAH187_A1596Single gene

DOOR ID: 2419401		BCAH187_A1596 View Structure
25 1526742-1526881 (+)FMN1527043-1527622 (+)BCAH187_A1643

Riboflavin transporter		BCAH187_A1643Single gene

DOOR ID: 2419431		BCAH187_A1643 View Structure
26 1601560-1601661 (+)purine1601768-1602362 (+)xpt

Xanthine phosphoribosyltransferase (XPRTase) (2)		BCAH187_A1737Operon

DOOR ID: 487249		BCAH187_A1736,
BCAH187_A1737 (xpt),
BCAH187_A1738 (pbuX)		 View Structure
27 1614211-1614374 (+)ykoK1614719-1615445 (+)BCAH187_A1753

Putative cation transporter		BCAH187_A1753Single gene

DOOR ID: 2419470		BCAH187_A1753 View Structure
28 1639546-1639590 (+)PreQ11639596-1640082 (+)BCAH187_A1767

BCAH187_A1767Single gene

DOOR ID: 2419478		BCAH187_A1767 View Structure
29 1790107-1790293 (-)lysine1788677-1789907 (-)dapG1

Aspartokinase 		BCAH187_A1932Single gene

DOOR ID: 2419543		BCAH187_A1932 (dapG1) View Structure
30 1855350-1855496 (+)ydaO-yuaA1855640-1857467 (+)BCAH187_A1994

Putative membrane protein		BCAH187_A1994Single gene

DOOR ID: 2419582		BCAH187_A1994 View Structure
31 2320946-2321065 (-)glycine2319470-2320838 (-)BCAH187_A2481

Sodium/alanine symporter family protein		BCAH187_A2481Single gene

DOOR ID: 2419821		BCAH187_A2481 View Structure
32 2490751-2490856 (+)TPP2490979-2491669 (+)tenA

Aminopyrimidine aminohydrolase 		BCAH187_A2668Single gene

DOOR ID: 2419916		BCAH187_A2668 (tenA) View Structure
33 2522505-2522620 (+)SAM2522759-2523308 (+)BCAH187_A2708

BCAH187_A2708Operon

DOOR ID: 487412		BCAH187_A2708,
BCAH187_A2709,
BCAH187_A2710		 View Structure
34 2868332-2868524 (+)lysine2868636-2870103 (+)lysP

Lysine-specific permease		BCAH187_A3102Single gene

DOOR ID: 2420134		BCAH187_A3102 (lysP) View Structure
35 3017343-3017444 (-)SAM3016048-3017254 (-)BCAH187_A3241

Peptidase M20 domain-containing protein 2		BCAH187_A3241Single gene

DOOR ID: 2420205		BCAH187_A3241 View Structure
36 3104371-3104469 (-)SAM3104012-3104270 (-)BCAH187_A3332

BCAH187_A3332Single gene

DOOR ID: 2420260		BCAH187_A3332 View Structure
37 3146810-3146952 (+)ydaO-yuaA3147049-3147193 (+)BCAH187_A3385

BCAH187_A3385Single gene

DOOR ID: 2420290		BCAH187_A3385 View Structure
38 3296396-3296502 (-)SAM3295657-3296326 (-)BCAH187_A3549

Amino acid ABC transproter permease protein		BCAH187_A3549Operon

DOOR ID: 487563		BCAH187_A3546,
BCAH187_A3547,
BCAH187_A3548,
BCAH187_A3549		 View Structure
39 3593268-3593369 (-)purine3592308-3593034 (-)BCAH187_A3840

Transcriptional regulator; GntR family		BCAH187_A3840Single gene

DOOR ID: 2420519		BCAH187_A3840 View Structure
40 3849713-3849901 (+)cobalamin3850028-3852317 (+)metE

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)		BCAH187_A4127Single gene

DOOR ID: 2420605		BCAH187_A4127 (metE) View Structure
41 3880513-3880654 (-)SAM3879239-3880421 (-)mtnK

Methylthioribose kinase (MTR kinase) (00)		BCAH187_A4160Operon

DOOR ID: 487685		BCAH187_A4159 (mtnA),
BCAH187_A4160 (mtnK)		 View Structure
42 3885527-3885632 (+)SAM3885696-3886941 (+)mtnW

2;3-diketo-5-methylthiopentyl-1-phosphate enolase (DK-MTP-1-P enolase) (RuBisCO-like protein) (RLP)		BCAH187_A4167Operon

DOOR ID: 487686		BCAH187_A4167 (mtnW),
BCAH187_A4168 (mtnX),
BCAH187_A4169 (mtnB),
BCAH187_A4170		 View Structure
43 3947311-3947454 (+)FMN3947765-3948878 (+)ribD

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		BCAH187_A4243Operon

DOOR ID: 487696		BCAH187_A4243 (ribD),
BCAH187_A4244 (ribE),
BCAH187_A4245 (ribBA),
BCAH187_A4246 (ribH)		 View Structure
44 4066780-4066889 (-)SAM4064875-4066708 (-)BCAH187_A4386

Homocysteine S-methyltransferase domain protein/methylenetetrahydrofolate reductase family protein		BCAH187_A4386Operon

DOOR ID: 487720		BCAH187_A4384 (murG2),
BCAH187_A4385 (metH),
BCAH187_A4386		 View Structure
45 4067093-4067202 (+)SAM4067295-4068408 (+)metI

Cystathionine gamma-synthase/O-acetylhomoserine thiolyase		BCAH187_A4389Operon

DOOR ID: 487721		BCAH187_A4389 (metI),
BCAH187_A4390		 View Structure
46 4540933-4541054 (-)SAM4539563-4540763 (-)metK

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		BCAH187_A4904Single gene

DOOR ID: 2420946		BCAH187_A4904 (metK) View Structure
47 4579181-4579282 (+)TPP4579369-4580038 (+)BCAH187_A4950

Probable proton-coupled thiamine transporter YuaJ		BCAH187_A4950Single gene

DOOR ID: 2420975		BCAH187_A4950 View Structure
48 4733150-4733257 (-)SAM4731824-4732850 (-)BCAH187_A5127

Methionine import ATP-binding protein MetN 		BCAH187_A5127Operon

DOOR ID: 487862		BCAH187_A5124,
BCAH187_A5125,
BCAH187_A5126,
BCAH187_A5127		 View Structure
49 4829881-4829940 (+)fluoride4829964-4830399 (+)BCAH187_A5235

Putative fluoride ion transporter CrcB		BCAH187_A5235Operon

DOOR ID: 487886		BCAH187_A5235,
BCAH187_A5236		 View Structure
50 4984900-4985015 (-)TPP4983025-4984786 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		BCAH187_A5398Single gene

DOOR ID: 2421170		BCAH187_A5398 (thiC) View Structure
51 5176702-5176806 (-)SAM5175310-5176609 (-)BCAH187_A5585

O-acetylhomoserine/O-acetylserine sulfhydrylase		BCAH187_A5585Operon

DOOR ID: 487953		BCAH187_A5584 (metA),
BCAH187_A5585		 View Structure