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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
65198-65309
(+)
TPP
65349-66327 (+)
THA_66
ABC-type thiamine transport system; periplasmic component
THA_66
Single gene
DOOR ID:
2418253
THA_66
View Structure
2
164726-164903
(+)
lysine
164972-165941 (+)
THA_170
Asd aspartate-semialdehyde dehydrogenase
THA_170
Operon
DOOR ID:
486567
THA_170,
THA_171
(dapF)
,
THA_172
(dapA)
,
THA_173
(dapB)
,
THA_174,
THA_175,
THA_176,
THA_177
View Structure
3
251636-251816
(+)
cobalamin
251877-252756 (+)
THA_254
Iron (III) ABC transporter; periplasmic-binding
THA_254
Operon
DOOR ID:
486583
THA_254,
THA_255,
THA_256,
THA_257
View Structure
4
260217-260336
(-)
FMN
257863-258895 (-)
ribD
Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
THA_262
Operon
DOOR ID:
486584
THA_259
(ribH)
,
THA_260
(ribB)
,
THA_261
(ribE)
,
THA_262
(ribD)
View Structure
5
1071318-1071487
(-)
cobalamin
1070882-1071062 (-)
THA_1047
THA_1047
Operon
DOOR ID:
486734
THA_1041
(cobD)
,
THA_1042
(cobQ)
,
THA_1043
(cobS)
,
THA_1044,
THA_1045,
THA_1046
(cobT1)
,
THA_1047
View Structure
6
1087782-1087965
(+)
cobalamin
1088026-1089061 (+)
cobT2
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) (1) (N(1)-alpha-phosphoribosyltransferase)
THA_1065
Operon
DOOR ID:
486738
THA_1065
(cobT2)
,
THA_1066
(cbiX)
,
THA_1067,
THA_1068
(cbiD)
,
THA_1069
(cbiE)
,
THA_1070,
THA_1071,
THA_1072
(cobM)
,
THA_1073,
THA_1074
(cbiH)
,
THA_1075
(cobK)
,
THA_1076
(hemA)
,
THA_1077
(hemC)
,
THA_1078,
THA_1079
(hemB)
,
THA_1080,
THA_1081
(hemL)
,
THA_1082
(cbiM)
,
THA_1083,
THA_1084,
THA_1085,
THA_1086
View Structure
7
1789775-1789886
(+)
TPP
1789955-1790729 (+)
THA_1798
Thiamine thiazole synthase
THA_1798
Operon
DOOR ID:
486873
THA_1798,
THA_1799
(thiC)
,
THA_1800,
THA_1801
View Structure
Genome:
Thermosipho africanus TCF52B
(
NC_011653.1
);
Phylum:
Thermotogae
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