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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
173725-173821
(+)
TPP
173868-175221 (+)
Blon_0145
Xanthine/uracil/vitamin C permease
Blon_0145
Operon
DOOR ID:
484534
Blon_0145,
Blon_0146,
Blon_0147
View Structure
2
446418-446532
(+)
FMN
446658-447759 (+)
Blon_0386
Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
Blon_0386
Operon
DOOR ID:
484577
Blon_0386,
Blon_0387,
Blon_0388,
Blon_0389
(ribH)
View Structure
3
485576-485733
(-)
ykoK
483516-485301 (-)
Blon_0419
Binding-protein-dependent transport systems inner membrane component
Blon_0419
Operon
DOOR ID:
484584
Blon_0418,
Blon_0419
View Structure
4
834894-835045
(-)
FMN
834233-834887 (-)
Blon_0723
Blon_0723
Single gene
DOOR ID:
2414137
Blon_0723
View Structure
5
925867-925975
(-)
TPP
922095-924849 (-)
Blon_0796
Multifunctional fusion protein [Includes: Phosphomethylpyrimidine synthase (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase) (TMP-PPase)]
Blon_0796
Single gene
DOOR ID:
2414178
Blon_0796
View Structure
6
1622042-1622173
(-)
TPP
1621044-1621308 (-)
Blon_1459
Blon_1459
Operon
DOOR ID:
484791
Blon_1459,
Blon_1460
View Structure
7
2042272-2042375
(-)
TPP
2041902-2042097 (-)
Blon_1873
Thiamine biosynthesis protein ThiS
Blon_1873
Operon
DOOR ID:
484871
Blon_1870,
Blon_1871,
Blon_1872
(thiG)
,
Blon_1873
View Structure
8
2060125-2060229
(-)
TPP
2059420-2060089 (-)
Blon_1888
Blon_1888
Operon
DOOR ID:
484875
Blon_1886,
Blon_1887,
Blon_1888
View Structure
9
2094277-2094346
(+)
fluoride
2094408-2094945 (+)
Blon_1917
Putative fluoride ion transporter CrcB
Blon_1917
Operon
DOOR ID:
484880
Blon_1917,
Blon_1918
View Structure
Genome:
Bifidobacterium longum subsp. infantis ATCC 15697
(
NC_011593.1
);
Phylum:
Actinobacteria
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