Genome: Shewanella piezotolerans WP3 (NC_011566.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 182337-182576 (-)FMN181508-182147 (-)swp_0169

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)		swp_0169Single gene

DOOR ID: 2408732		swp_0169 (ribB) View Structure
2 349916-349981 (-)fluoride349106-349799 (-)swp_0348

NifU-like domain containing protein		swp_0348Operon

DOOR ID: 482437		swp_0347,
swp_0348		 View Structure
3 997853-998001 (+)cobalamin998057-998897 (+)swp_0994

ABC transporter (4)		swp_0994Operon

DOOR ID: 482549		swp_0994,
swp_0995,
swp_0996 (cobT),
swp_0997,
swp_0998		 View Structure
4 2435383-2435481 (+)TPP2435553-2437650 (+)swp_2330

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		swp_2330Operon

DOOR ID: 482766		swp_2330,
swp_2331,
swp_2332,
swp_2333,
swp_2334,
swp_2335,
swp_2336 (thiH)		 View Structure
5 3052290-3052420 (-)TPP3050051-3052238 (-)swp_2907

TonB-dependent receptor		swp_2907Operon

DOOR ID: 482855		swp_2904,
swp_2905,
swp_2906,
swp_2907		 View Structure
6 3669813-3670034 (-)lysine3668161-3669733 (-)swp_3470

Na+/H+ antiporter NhaC		swp_3470Single gene

DOOR ID: 2410333		swp_3470 View Structure
7 4165165-4165364 (-)cobalamin4163193-4165044 (-)swp_3945

TonB-dependent vitamin B12 receptor		swp_3945Single gene

DOOR ID: 2410567		swp_3945 View Structure
8 4548858-4549038 (-)lysine4547358-4548723 (-)swp_4345

Aspartokinase 		swp_4345Operon

DOOR ID: 483084		swp_4344,
swp_4345		 View Structure
9 4572386-4572515 (-)glycine4570805-4572179 (-)swp_4361

Sodium:alanine symporter		swp_4361Single gene

DOOR ID: 2410810		swp_4361 View Structure
10 4638988-4639174 (+)yybP-ykoY4639852-4641316 (-)swp_4429

Catalase 		swp_4429Single gene

DOOR ID: 2410840		swp_4429 View Structure
11 5111307-5111406 (-)purine5110286-5111282 (-)swp_4887

Adenosine deaminase (Adenosine aminohydrolase)		swp_4887Single gene

DOOR ID: 2411103		swp_4887 View Structure
12 5227874-5228010 (-)MOCO5226297-5226822 (-)swp_5008

Molybdenum cofactor biosynthesis protein B		swp_5008Operon

DOOR ID: 483187		swp_5008,
swp_5009 (moaA)		 View Structure