RiboswitchDB

Genome: Aliivibrio salmonicida LFI1238 chromosome II (NC_011313.1); Phylum: Gammaproteobacteria

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

544938-545035 (+)

TPP

545135-545990 (+)

thiD

Phosphomethylpyrimidine kinase

Operon

DOOR ID: 474239

VSAL_II0486 (thiD),
VSAL_II0487,
VSAL_II0488,
VSAL_II0489,
VSAL_II0490,
VSAL_II0491 (thiM),
VSAL_II0492 (thiE)

2

1142180-1142244 (-)

fluoride

1141262-1141955 (-)

VSAL_II1046

Operon

DOOR ID: 474336

VSAL_II1045,
VSAL_II1046

3

1177143-1177271 (-)

yybP-ykoY

1176490-1177060 (-)

VSAL_II1080

Membrane protein

Single gene

DOOR ID: 2393043

VSAL_II1080

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";}}