Genome: Klebsiella pneumoniae 342 (NC_011283.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 285350-285531 (-)ykoK284279-285293 (-)KPK_0257

Divalent cation transporter; MgtE family
KPK_0257Single gene

DOOR ID: 2386967
KPK_0257 View Structure
2 679844-679995 (+)FMN680100-680754 (+)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
KPK_0668Single gene

DOOR ID: 2386714
KPK_0668 (ribB) View Structure
3 926330-926508 (+)cobalamin926600-927977 (+)cobB

Cobyrinate a;c-diamide synthase (1) (Cobyrinic acid a;c-diamide synthetase)
KPK_0916Operon

DOOR ID: 470850
KPK_0916 (cobB),
KPK_0917 (cobD),
KPK_0918 (cbiC),
KPK_0919 (cbiD),
KPK_0920 (cbiE),
KPK_0921 (cbiT),
KPK_0922 (cobM),
KPK_0923 (cbiG),
KPK_0924 (cobJ),
KPK_0925 (cobK),
KPK_0926 (cbiK),
KPK_0927 (cobI),
KPK_0928 (cbiM),
KPK_0929 (cbiN),
KPK_0930 (cbiQ),
KPK_0931 (cbiO),
KPK_0932 (cobQ),
KPK_0933 (cobU),
KPK_0934 (cobT)
View Structure
4 1650667-1650764 (+)TPP1650798-1651572 (+)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
KPK_1618Operon

DOOR ID: 470991
KPK_1618 (thiM),
KPK_1619 (thiD)
View Structure
5 2016272-2016374 (-)yybP-ykoY2015587-2016154 (-)KPK_1956

Putative manganese efflux pump MntP
KPK_1956Single gene

DOOR ID: 2387716
KPK_1956 View Structure
6 2593714-2593793 (+)ZMP-ZTP2593810-2594443 (+)KPK_2537

Translocator protein; LysE family
KPK_2537Single gene

DOOR ID: 2387806
KPK_2537 View Structure
7 2616626-2616727 (-)TPP2615861-2616557 (-)KPK_2557

Aminopyrimidine aminohydrolase
KPK_2557Operon

DOOR ID: 471154
KPK_2554,
KPK_2555,
KPK_2556,
KPK_2557,
KPK_2558
View Structure
8 2679674-2679772 (+)ykkC-yxkD2679828-2680887 (+)KPK_2621

ABC transporter; periplasmic substrate-binding protein
KPK_2621Operon

DOOR ID: 471164
KPK_2621,
KPK_2622,
KPK_2623,
KPK_2624,
KPK_2625
View Structure
9 2683979-2684026 (+)mini-ykkC2684045-2687651 (+)uca

KPK_2626Operon

DOOR ID: 471165
KPK_2626 (uca),
KPK_2627 (atzF)
View Structure
10 3635736-3635790 (+)fluoride3636328-3640777 (-)mukB

Chromosome partition protein MukB (Structural maintenance of chromosome-related protein)
KPK_3608Operon

DOOR ID: 471331
KPK_3608 (mukB),
KPK_3609 (mukE),
KPK_3610 (mukF),
KPK_3611 (smtA)
View Structure
11 3808554-3808692 (-)MOCO3807040-3807553 (-)moaB

Molybdenum cofactor biosynthesis protein B
KPK_3761Operon

DOOR ID: 471363
KPK_3757,
KPK_3758 (moaE),
KPK_3759 (moaD),
KPK_3760 (moaC),
KPK_3761 (moaB),
KPK_3762 (moaA)
View Structure
12 4716836-4716965 (+)TPP4716998-4717982 (+)tbpA

Thiamin/thiamin pyrophosphate ABC transporter; periplasmic thiamin/thiamin pyrophospate-binding protein
KPK_4675Operon

DOOR ID: 471536
KPK_4675 (tbpA),
KPK_4676 (thiP),
KPK_4678 (thiQ)
View Structure
13 5065385-5065500 (-)Mg sensor5062577-5065286 (-)mgtA

Magnesium-translocating P-type ATPase
KPK_5014Single gene

DOOR ID: 2388336
KPK_5014 (mgtA) View Structure
14 5172423-5172467 (-)mini-ykkC5172091-5172409 (-)sugE

KPK_5119Single gene

DOOR ID: 2387776
KPK_5119 (sugE) View Structure
15 5316321-5316556 (+)lysine5316735-5318085 (+)lysC

Aspartokinase
KPK_5260Single gene

DOOR ID: 2388650
KPK_5260 (lysC) View Structure
16 5358563-5358687 (+)TPP5358773-5360669 (+)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
KPK_5298Operon

DOOR ID: 471659
KPK_5298 (thiC),
KPK_5299 (thiE),
KPK_5300 (thiF),
KPK_5301 (thiS),
KPK_5302 (thiG),
KPK_5303 (thiH)
View Structure
17 5493171-5493358 (-)cobalamin5491249-5493106 (-)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)
KPK_5426Operon

DOOR ID: 471682
KPK_5425 (murI),
KPK_5426 (btuB)
View Structure