Genome: Salmonella enterica subsp. enterica serovar Dublin str. CT 02021853 (NC_011205.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 121999-122098 (-)TPP120983-121967 (-)tbpA

SeD_A0112Operon

DOOR ID: 467986		SeD_A0110 (thiQ),
SeD_A0111 (thiP),
SeD_A0112 (tbpA),
SeD_A0114,
SeD_A0115 (sgrR)		 View Structure
2 894657-894801 (+)MOCO895799-896312 (+)moaB

SeD_A0897Operon

DOOR ID: 468129		SeD_A0896 (moaA),
SeD_A0897 (moaB),
SeD_A0898 (moaC),
SeD_A0899 (moaD),
SeD_A0900 (moaE),
SeD_A0901		 View Structure
3 1435671-1435772 (-)yybP-ykoY1434992-1435559 (-)SeD_A1481

Probable manganese efflux pump MntP		SeD_A1481Single gene

DOOR ID: 2381406		SeD_A1481 View Structure
4 2244321-2244496 (-)cobalamin2242844-2244224 (-)cobB

SeD_A2370Operon

DOOR ID: 468362		SeD_A2351 (cobT),
SeD_A2352 (cobS),
SeD_A2353 (cobU),
SeD_A2354 (cobQ),
SeD_A2355 (cbiO),
SeD_A2356 (cbiQ),
SeD_A2357,
SeD_A2358 (cbiM),
SeD_A2359 (cobI),
SeD_A2360,
SeD_A2361 (cobK),
SeD_A2362 (cobJ),
SeD_A2363,
SeD_A2364 (cobM),
SeD_A2365,
SeD_A2366 (cbiE),
SeD_A2367 (cbiD),
SeD_A2368 (cbiC),
SeD_A2369 (cbiB),
SeD_A2370 (cobB)		 View Structure
5 2372607-2372703 (-)TPP2371777-2372575 (-)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)		SeD_A2491Operon

DOOR ID: 468379		SeD_A2489,
SeD_A2490 (thiD),
SeD_A2491 (thiM)		 View Structure
6 3405663-3405861 (-)FMN3404903-3405557 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)		SeD_A3548Single gene

DOOR ID: 2383012		SeD_A3548 (ribB) View Structure
7 4378923-4379116 (+)cobalamin4379181-4381026 (+)btuB

SeD_A4536Operon

DOOR ID: 468753		SeD_A4536 (btuB),
SeD_A4537 (murI)		 View Structure
8 4412908-4413071 (-)TPP4410926-4412822 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		SeD_A4570Operon

DOOR ID: 468759		SeD_A4565 (thiH),
SeD_A4566 (thiG),
SeD_A4567 (thiS),
SeD_A4568 (thiF),
SeD_A4569 (thiE),
SeD_A4570 (thiC)		 View Structure
9 4691925-4692037 (+)Mg sensor4692061-4694842 (+)mgtA

SeD_A4838Single gene

DOOR ID: 2382201		SeD_A4838 (mgtA) View Structure