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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
352723-352910
(-)
yybP-ykoY
351738-352695 (-)
VFMJ11_A0314
Tellurium resistance protein TerC
VFMJ11_A0314
Single gene
DOOR ID:
2381152
VFMJ11_A0314
View Structure
2
392903-393000
(+)
TPP
393102-393981 (+)
thiD
Phosphomethylpyrimidine kinase
VFMJ11_A0354
Operon
DOOR ID:
467782
VFMJ11_A0354
(thiD)
,
VFMJ11_A0355,
VFMJ11_A0356,
VFMJ11_A0357,
VFMJ11_A0358,
VFMJ11_A0359
(thiM)
,
VFMJ11_A0360
(thiE)
View Structure
3
1206108-1206234
(+)
yybP-ykoY
1206317-1206887 (+)
VFMJ11_A1086
Integral membrane protein
VFMJ11_A1086
Single gene
DOOR ID:
2380869
VFMJ11_A1086
View Structure
4
1216361-1216491
(-)
cobalamin
1215424-1216342 (-)
VFMJ11_A1095
ABC transporter; periplasmic component
VFMJ11_A1095
Operon
DOOR ID:
467907
VFMJ11_A1093,
VFMJ11_A1094,
VFMJ11_A1095
View Structure
5
1365379-1365444
(-)
fluoride
1364535-1365228 (-)
VFMJ11_A1229
VFMJ11_A1229
Operon
DOOR ID:
467932
VFMJ11_A1228,
VFMJ11_A1229
View Structure
Genome:
Vibrio fischeri MJ11 chromosome II
(
NC_011186.1
);
Phylum:
Gammaproteobacteria
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