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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
884104-884209
(+)
SAM
885690-886764 (+)
Cphamn1_0820
Homoserine O-acetyltransferase (HAT) (1) (Homoserine transacetylase) (HTA)
Cphamn1_0820
Operon
DOOR ID:
446675
Cphamn1_0819,
Cphamn1_0820
View Structure
2
984939-985042
(-)
TPP
983174-984866 (-)
Cphamn1_0909
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Cphamn1_0909
Single gene
DOOR ID:
2339518
Cphamn1_0909
View Structure
3
1285340-1285529
(+)
cobalamin
1285699-1287892 (+)
Cphamn1_1191
Anaerobic ribonucleoside-triphosphate reductase
Cphamn1_1191
Operon
DOOR ID:
446758
Cphamn1_1191,
Cphamn1_1192
View Structure
4
1642769-1643008
(-)
cobalamin
1640576-1642550 (-)
Cphamn1_1519
TonB-dependent receptor
Cphamn1_1519
Operon
DOOR ID:
446821
Cphamn1_1516,
Cphamn1_1517,
Cphamn1_1518,
Cphamn1_1519
View Structure
Genome:
Chlorobium phaeobacteroides BS1
(
NC_010831.1
);
Phylum:
Bacteroidetes/Chlorobi group
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