Genome: Xanthomonas oryzae pv. oryzae PXO99A (NC_010717.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 1028717-1028892 (+)FMN1029059-1029662 (+)ribE

Riboflavin synthase; alpha subunit

DOOR ID: 437873
PXO_04399 (ribE),
PXO_04398 (ribAB)
View Structure
2 1090443-1090558 (-)SAH1088967-1090410 (-)ahcY

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
PXO_04338Single gene

DOOR ID: 2321294
PXO_04338 (ahcY) View Structure
3 1282376-1282490 (-)glycine1279321-1282285 (-)gcvP

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))
PXO_04482Single gene

DOOR ID: 2321374
PXO_04482 (gcvP) View Structure
4 2555457-2555533 (+)fluoride2555619-2556951 (+)PXO_01048

Cl-channel; voltage gated
PXO_01048Single gene

DOOR ID: 2321901
PXO_01048 View Structure
5 2767544-2767620 (+)fluoride2767706-2769038 (+)PXO_06118

Cl-channel; voltage gated
PXO_06118Single gene

DOOR ID: 2321986
PXO_06118 View Structure
6 3212571-3212690 (-)SAM3211468-3212491 (-)PXO_01680

Homoserine O-succinyltransferase (HST) (6) (Homoserine transsuccinylase) (HTS)

DOOR ID: 438283
PXO_01681 (metB),
View Structure
7 4002668-4002893 (-)cobalamin4000673-4002533 (-)btuB

TonB-dependent outer membrane Receptor
PXO_02166Single gene

DOOR ID: 2322505
PXO_02166 (btuB) View Structure
8 4454150-4454247 (-)TPP4452180-4454058 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
PXO_02603Single gene

DOOR ID: 2322725
PXO_02603 (thiC) View Structure
9 5044956-5045119 (+)yybP-ykoY5045906-5049359 (-)PXO_02752

Two-component system sensor protein
PXO_02752Single gene

DOOR ID: 2323003
PXO_02752 View Structure